Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3714 |
Symbol | |
ID | 5664099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4519808 |
End bp | 4520599 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641238374 |
Product | ABC-3 protein |
Protein accession | YP_001503560 |
Protein GI | 157963526 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0390511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATC TCGATCTACT CTCTATCTTG CTGCCTGCTT TCGTAGCGGG GATCTTGGTG TTATCCACTC ATGTTGTCTT AGGGCAACAG GTTTTAAAGC GAGGCATTAT CTTTATCGAT CTGGCGATTG CTCAGGTCGC CGCACTAGGT GCGATCGTCG GCCACTTAAA TCACGACATA GAAGCCCTGC CATTTTCCAA TGTGTGGATG CCTGCGCTAT TTGCTATCGC GGGAGCTGCT TTCATCGCTT GGCTGTCTAA GCGGATGGCT GATGAATTGG AAGCGATAAT CGGTTGTTTC TATGTGCTTG CAGCCGTGGC TGCCATGTTG CTGCTGTCTA ACGACCCCCA TGGCGCAGAG ATGCTCAAGC AGCTGATGTC TGGCCAGATC TTATGGGTAA GCTGGGGTCA GTTAATTCTG CCAGCCTGTA TCTACTCGGC GATATTACTA GCGCTGATTT ATCGCCCCTC CTTACTCGAG GGCCGAGCTT TTTACCTGCT CTTCGCAGTG GTGATCACTC TGTCTGTCGA ATTAGTCGGT GTATATCTGG TGTTTAGTAG CTTGATCTTG CCTGCGCTCG CGGTGAATCA CTTCAGTGGA CGTTTTAAGC TGGGCTGGGC CTATTTAGTC GGCTTAGTGG GGTATGTCGC GGGGTTAGTC TTGTCTGCGA GTCTAGATCT TCCAAGCGGC GCAGCCATAG TGGCAACCTT AGCGGTGACG GCAATACTAT TTAGATTGAT GCTGCATCTG AAAGCCAGAT ACTCGGCTTT GGAAAATGAA TTGAGGAACT AG
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Protein sequence | MFDLDLLSIL LPAFVAGILV LSTHVVLGQQ VLKRGIIFID LAIAQVAALG AIVGHLNHDI EALPFSNVWM PALFAIAGAA FIAWLSKRMA DELEAIIGCF YVLAAVAAML LLSNDPHGAE MLKQLMSGQI LWVSWGQLIL PACIYSAILL ALIYRPSLLE GRAFYLLFAV VITLSVELVG VYLVFSSLIL PALAVNHFSG RFKLGWAYLV GLVGYVAGLV LSASLDLPSG AAIVATLAVT AILFRLMLHL KARYSALENE LRN
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