| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3702 |
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| Symbol | |
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| ID | 5664087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4503657 |
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| End bp | 4507361 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238362 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001503548 |
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| Protein GI | 157963514 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACCGA TTGAGCCGAC TCTTCAGCTA AAGTCAACGA TTCAAAAGAA CTATAACAGA
GCGGTTTTTT ACACCTATAT CGGCGTAATC ATCATGGCTT TGGCGACAGC TTGGGTGTCA
TTTGACCGCC AAAAGGCCCA GTTGGTCGAG CAGACCGAAG AGATGGTTGA GCGCCATGTA
CTACAAGTGG ACTTGCTGCT TGAGTCGAGT ATGAAAGCCG TTACCAGTTT GCGTAACGTT
GCTGTCGACC ATTTACGTTT AGGCGAGTTG GTGCGTAAAG ACCGACTGCC GCAATATGAA
AAGTTTAATG AAAGTGGTCA GTTCTTTACC TTGGAGCCTG CCTACGCCAA GAGTGGTGAG
CCGTTTACCA ACATGGGCCG CATTACCGGT TCAGGCTCGC TAAATGGTCG TAGCGACAAG
TTCTATCAAG AGCTTGAGAT GCTGTTTGAG CTTTCTCTGT CGTTCCCTGT GGCTAACGAA
GCCGCGCCAA AAGCCTCATC GATTTACTAC ATCTCTAAAC GACGCATCAT GTCTTATTTC
CCGTGGCCGT CAGATGAACA ACGTTTTCGA GATGAACTAC TTAATAAGAA GCAGTTTCAG
CTAGTCACAC CATCAAATAA TCCTCAGCGC AGTGTCGCCT GGAGCCCTGC CTACGTTGAA
GCTACGGGGA AAGGATTGCT GACCACCCTA GGGATCCCCA TCTATCTAGA AGACGAGTTT
ATCGGCTCGA TTAACTTAGA TATGACCCTT GCTTCATTGC GTAAGCAAAT TCGCCTCTAT
TTTAAAATGC CCGGCACGGT GATCTTGCTG GATCAAAACA ACAATATTCT GACCCATAGT
GATATCGATA CCTCAGATGT AAACCGCGTC TATCACATTA GTCAGAAGAT CCCATCTGAG
CTGCATTCGA TCCCAGAGTC TGAGTTATTC GATGCCCACG AAGGCATTAT TCGTAACGGC
TATTATATCC ACTCGGTGGC GCTACATAAC GCACCGTGGC GCTTGCTCTA TCTACAAGAT
GTCGATGAAT TATTTAAAGA TTCATGGGAA AAACTGGAGC TCACTTTCGT GCTGGTGGTA
ATGGCGTTAT CGGTGTTGGT GACGATTGTT CACTGGCTGA CGCGTCGCTC ATTCGTTAAC
CCTGCCTCTA GATTATTGAC CCATTTAGAG GAGTGCTCGG CCGAGCCTAT TAAGCCGCCA
GAGAAGATCA CCGTAGGTTG GGCTCCCTGG TTCCAGCTGG TGAGCCGGAT TTTTGAAGAG
AATAAACAGT ATACGCGCCA CTTGGCGGAG CAAAACAGGC GACTCGATAA GCTAGTGGCC
CAGCGTACCG AAAGGCTAAA AGACACCACC GAGCGGCGTG AGCAGGAATA TGTCTTGCTA
CGATCGCTAT TGGACTCGAT CCCAGAGGCG ATTGTCTTTA AAGATAAAGA GGGTCGCTAC
CTAGGCTGCA ACAAGTCGGC GGAGCGCATG CTGGGCTTTA GCGAGAGTGA GATGATCGGC
CAGTTCTCCG ATGCCTTGAC GGCCGATGAG CAGTCGGCAC GAATTCGCGC CGAAGATGAA
CGGGTACTGA CCGAGAGAAC ACCGCTTCGT TACCAAGAGA AGGTAGAGCT TGCGGGTAAG
CCTGTACTGC TCGACACCTT GAAGATCCCA TTCTACAACC GTCGTGGCGA ACTACTGGGT
TTGATTGCCG TCTGGCGTGA TGTGACTCGT GAGTACGAGT CGGCAGAGCA GCTACGTCTA
TCGGAAGAGC GTTATCATCT TGCCATGGAC GCGGTAGAAG ATGTTCTGTG GGACTGGTAT
TTAGACTCGG AGCAGATCAT CTGTAATCCG GCTTACTATT CGATGCTGGG TTACAAGGTC
AATGAATTCC CTGCCTTGGT GTCGACTATC GATGAGCTTA TTCATCCGGA CGATCGTATA
AGAGTGGAGG AGTATCGCGA GCAATATCTT GCTAATCCAG TCGGTGCTTT CGATATAGAA
TTTAGAATGT TAGGTAAGAG CGGCGGTTAT CACTGGTTAC TTTCTCGTGG CCGAGTGGTG
GAATACACCC CTAACAACCA ACCTAAGCGT ATGTTGGGAA CTCACAAGGA TATTACCCGC
CATAAACGCA ACGAAGTCGC CATGCTCGAG GCCAAGCAGG ACGCTGAGAT GGCGAACCTG
TATAAGAGTG AATTCTTGGC TAACATGAGT CATGAAATTC GTACGCCAAT GAACGCCATT
ATAGGTATGT TGCAGCTCGC ACAGCGCACC TCGCTCACGC CGCAGCAGAA AGATTACCTA
GAGAAGGCTG GCTTCTCGGC GCACTCATTG CTGCGGATCA TCAACGACAT CTTGGATTTC
TCTAAGATCG AGGCGGGTAA GTTAGAGCTT GAGCGCGTAG CCTTTCCGCT GGACAAGGTG
TTGGATCATG CGCTGGATCT TAACGCGCTA AAGGCGCAAG AGAAGGGAGT CGAGCTACTG
CTTTATGCAC CAGTGACCGC AGGCTTGATC TTAGAAGGCG ATCCGCTGCG TCTCGGGCAG
GTACTGATTA ACTTACTGTC GAATGCGGTG AAGTTTACTC AGTCCGGTGA GATTGAACTT
GGCTGTGAAG ATGTGGGCGA GAGAGATCAT CGTATTACGC TCAAGTTCTG GATCCGCGAT
ACCGGGATCG GGATCAGTAA AGAGCAACAA GCGACGCTGT TCGATGCCTT TGCTCAGGCC
GATGGTTCTA CCACCCGTAA ATATGGTGGT ACTGGGCTTG GCTTATCTAT CAGTAAGCAC
TTAGTGTCAC TGATGGGCGG CACCATGCAG GTCGAGAGCG AGATGAGTGT GGGCAGTACC
TTTAGCTTCA CCATTAGCTT TGAGATTGCC GAAGAAGGCG AGGTGCTACC TCTAGTGGTG
CCTGAGACCT TAGGTAACCT AAAGACCTTA GTTATCGATG ATAACCCGAC GGCGCTGCAG
ATCTATTCGA GTGTGATGCG AGACTTCCAC TTTAATGTCG ATACCGCCGC CAGCGGCCCC
GAGGGCTTAT ATAAACTAAG TAAGAACCCT GTAGATCTGC TATTGCTCGA CTGGATGATG
CCAGAGATGG ACGGCGTCGA GGTGATCAAG CAGATCGATC AGATGGTAGC CGATGGCCGT
TTAGAGAAGC GGCCCATTAT CATCATGATG ACTGCTTACA CCGCAGAGCC GATGCAAAAA
GATGTGGAGG CGGCCAACGT CTTCGCCCTG CTGCAGAAAC CGTTTAAGGC CTCTTCGCTA
TTCGATGAGA TTATCTCGGC CTTCGCCGAT GAGCCGAGTT TAAATCCGTT ACCGGAGGCT
AATGAAGAGG AAGCCGACCA AGACGCTGGC TATGTGCTGC TGGTGGAAGA TAACTTTATC
AACCAACAGG TAGCTACCGA GCTGCTTAAG AGTGCAGGTT ACACGGTCGA TGTTGCCGAA
AACGGCCAAA TTGCCCTGGA TATGCTTGAT AAGGCCAAGT ATGACGCGGT GTTGATGGAT
ATTCAGATGC CAGTGATGGA CGGTCTTACT GCGACCAAGG AGCTTAGAAA ACGCTACCCT
GTCGACGAGT TACCTGTGAT CGCGATGACG GCTCATGCCA TGTCGGGTGA CAGAGAGAAG
AGTTTGGCTG CAGGAATGAA CGCTCATATT ACTAAACCAA TCGTGCTCAC CGAGTTGTTT
GACACCTTGA GCCACTGGAT TGGTGAGTGT GGCAGGAAGT CTTAA
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| Protein sequence | MKPIEPTLQL KSTIQKNYNR AVFYTYIGVI IMALATAWVS FDRQKAQLVE QTEEMVERHV
LQVDLLLESS MKAVTSLRNV AVDHLRLGEL VRKDRLPQYE KFNESGQFFT LEPAYAKSGE
PFTNMGRITG SGSLNGRSDK FYQELEMLFE LSLSFPVANE AAPKASSIYY ISKRRIMSYF
PWPSDEQRFR DELLNKKQFQ LVTPSNNPQR SVAWSPAYVE ATGKGLLTTL GIPIYLEDEF
IGSINLDMTL ASLRKQIRLY FKMPGTVILL DQNNNILTHS DIDTSDVNRV YHISQKIPSE
LHSIPESELF DAHEGIIRNG YYIHSVALHN APWRLLYLQD VDELFKDSWE KLELTFVLVV
MALSVLVTIV HWLTRRSFVN PASRLLTHLE ECSAEPIKPP EKITVGWAPW FQLVSRIFEE
NKQYTRHLAE QNRRLDKLVA QRTERLKDTT ERREQEYVLL RSLLDSIPEA IVFKDKEGRY
LGCNKSAERM LGFSESEMIG QFSDALTADE QSARIRAEDE RVLTERTPLR YQEKVELAGK
PVLLDTLKIP FYNRRGELLG LIAVWRDVTR EYESAEQLRL SEERYHLAMD AVEDVLWDWY
LDSEQIICNP AYYSMLGYKV NEFPALVSTI DELIHPDDRI RVEEYREQYL ANPVGAFDIE
FRMLGKSGGY HWLLSRGRVV EYTPNNQPKR MLGTHKDITR HKRNEVAMLE AKQDAEMANL
YKSEFLANMS HEIRTPMNAI IGMLQLAQRT SLTPQQKDYL EKAGFSAHSL LRIINDILDF
SKIEAGKLEL ERVAFPLDKV LDHALDLNAL KAQEKGVELL LYAPVTAGLI LEGDPLRLGQ
VLINLLSNAV KFTQSGEIEL GCEDVGERDH RITLKFWIRD TGIGISKEQQ ATLFDAFAQA
DGSTTRKYGG TGLGLSISKH LVSLMGGTMQ VESEMSVGST FSFTISFEIA EEGEVLPLVV
PETLGNLKTL VIDDNPTALQ IYSSVMRDFH FNVDTAASGP EGLYKLSKNP VDLLLLDWMM
PEMDGVEVIK QIDQMVADGR LEKRPIIIMM TAYTAEPMQK DVEAANVFAL LQKPFKASSL
FDEIISAFAD EPSLNPLPEA NEEEADQDAG YVLLVEDNFI NQQVATELLK SAGYTVDVAE
NGQIALDMLD KAKYDAVLMD IQMPVMDGLT ATKELRKRYP VDELPVIAMT AHAMSGDREK
SLAAGMNAHI TKPIVLTELF DTLSHWIGEC GRKS
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