Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3658 |
Symbol | |
ID | 5664043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4449890 |
End bp | 4450921 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238318 |
Product | multidrug resistance efflux pump |
Protein accession | YP_001503504 |
Protein GI | 157963470 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGA TAATGCTGCC GTATATTTTT ATCGTATGGT TACTGTTTAA GTTCAAAGTA ATCAAAGCCA GACCACGAAA CTACTTTATT AGCGTGTTTG TAGGTTGTTT AATTGCACTC ACGCTATTTT TGGCTCATCG CTTTTATTCT CCATCCGATC TCACTAACTC GACGACAGTA AGGGCACCTC ACGCGATCCT CTCACCCGCC TTTGGACAAC AGATAGATAA AGTGGCAATC GATCATAACC AGCAGGTAAA CAAAGGCGAC CTGCTATACA CCTTGGTCGA CGACAAGGTC AGCAGCGCTA TCGATGAAAT AAATGCACGC ATCAATGAAG TCGAACGCAA CATAGAAGCC ACTGAGGTAA AGCTGGCGCA AGCAAAGCGT ACTCATTTGC GTAAAGCCAA TCTTGGTGAG CATGTTAGCG AGCGAGACTT AGAGAACGCT GAAGATCACG TGGAAATTAT TAAAGCAGAG CTTAAGGTGC AACACGCCCA GCTAGAGGTG AAATATGCTC AGCTAAGAAA GCAAGAATTT GAGCTAAAAA GGCTTGAAGT TCGGGCGCCA TTCGACGGCA TGGTGACCCA TGTGTATATT GCCGATGGCT CAAGAGTCGG CGCTATGCAC CTATGGGATA CCGGCCGTAA ATTTGTCGAG ATGCGTATTC CCGATCAGTC ATTTGCCTAC ATACAACCGG GTCAGTTTGC CGAGTTTTAT ATCAACGCCT ATCCAGGTCA GATATTTAGA GCCAGAGTCC ACAGTAAGGT TGAAGCCACT GGTGAAGCTC AAGGCGACAT CTTGCCTCGC GAGCAGATGG TATCACGTCA TATCAACTTA GGCTCAATGC CCGTGGGCAG AACCGTGGTA CTTGAAATAG ATGACGACAC CATGGCCATG TTGCCGATTG GTGCGACGGG CTCGGCTTGG ATAAGTGCCG ACAAGCCCTC TTCACTTCTA GGCTTTCTCG ATATCATTGG CGGGGCAACG GTGAGACTCA CCGCAGTTAA GGCTTACCTT AACCCGTTAT AA
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Protein sequence | MKEIMLPYIF IVWLLFKFKV IKARPRNYFI SVFVGCLIAL TLFLAHRFYS PSDLTNSTTV RAPHAILSPA FGQQIDKVAI DHNQQVNKGD LLYTLVDDKV SSAIDEINAR INEVERNIEA TEVKLAQAKR THLRKANLGE HVSERDLENA EDHVEIIKAE LKVQHAQLEV KYAQLRKQEF ELKRLEVRAP FDGMVTHVYI ADGSRVGAMH LWDTGRKFVE MRIPDQSFAY IQPGQFAEFY INAYPGQIFR ARVHSKVEAT GEAQGDILPR EQMVSRHINL GSMPVGRTVV LEIDDDTMAM LPIGATGSAW ISADKPSSLL GFLDIIGGAT VRLTAVKAYL NPL
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