Gene Spea_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3655 
Symbol 
ID5664040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4446808 
End bp4448991 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content49% 
IMG OID641238315 
Productglycoside hydrolase family protein 
Protein accessionYP_001503501 
Protein GI157963467 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAC TAAAACTGAA TCTACTAGGT GCCAGCATTG CGCTTGCTAT GGGGGCTATT 
TCTTCCCCAG CTATGGCCAA TGGTACCGAT ATGGTAAATC CGCAAGCCGG TGTGGTTGTG
GGTTATTGGC ATAACTGGTG CGACGGCTCT GGCTATAAGG GGGGCATTGC ACCTTGTGTA
ACCTTAACCG ATGTTGATCC GCAGTATAAC GTGGTCGATG TGTCATTTAT GAAGGTTTAT
GGCGCCGTAG GCACGATTCC TACATTTAAA TTAGACCCTG CAATAGGCCT ATCAGAGGCC
CAATTTATTG AGCAGATTAG CGAGCTTAAC CGTCAAGGAC GTTCGGTATT AATCGCATTG
GGTGGCGCCG ATGCGCACAT CGAACTGCGT AATGGTCAAG AGCAGGCTCT CGCCGATGAA
ATTATTCGTC TAGTCGAGGT TTATGGCTTT GACGGCCTAG ATATCGATCT TGAGCAGGCT
GCTGTGACCG CTGCCGATAA CCAAACTGTT ATTCCTGCGG CGCTACGCAT AGTTAAAGAT
TACTACCGTG ATCAGGGGAA GAACTTCCTA ATCACCATGG CGCCAGAGTT TCCGTATCTG
ACAACAGGTG GTAAGTATGT GCCTTATATC ACCGAGCTAG AAGGTTATTA CGACTGGATC
AACCCACAGT TCTATAACCA AGGTGGCGAT GGTATTTATA TCGAAGGCCT AGGCTGGATT
GCACAGAACA ACGATAACCT TAAGCAAGAG TTTATCTACC ATATCGCCGA TGCCTTAGCG
AACGGCACTA ACGGCTTTAC TAAGATCCCC CACGATAAGT TAGTCTTTGG TATTCCAACC
AACATCGACG CGGCCGCGAC AGGTTACATC AAACAACCGC AAAAACTCTA TGCGGCATTT
GAGCAGCTAA AAGCCCAAGG CCAGCCACTG CGCGGTGTAA TGACGTGGTC GGTTAACTGG
GACATGGGGA AAAACTCTGC GGGTCAGGCT TATAACGAGT CATTCATCAA GGCCTACGGT
CCATTCATCC ATGGCCAAGA TATTCTGCCT CCAGAGCCGG ATAACGGTAA GCCGATTTTT
GCAGGTGTCA GCAATGCTCG CGTTAAACTC GGTGCTCAGT TTGATGCGCT AGCAGGTGTA
ACGGCTCGAG ATATGGAAGA TGGCGATTTA ACCTCTGATA TCCAAGTCGA AGGCGCGATT
GATACTCAGA CACTAGGTTT GTATGCACTA ACTTATCGTG TTAGCGATAG TGACGATAAC
CTAACAGAGC AAGTGCGCAC GGTTGAAGTC TATAACACTA AGCCTGAAAT TAAAGGCGTA
GCCAATGCTA GCATTTTACT GGGCAGTGCT TTCGATGCGA TGGCAGGTGT AAGTGCAATC
GATGCTGAAG ATGGCGACTT AACGGCGCAA ATTAGCGTCG ATGGTGATGT CGATACCGAC
ACTCTTGGTC AGTACTCACT AACTTACCGC GTTAGCGACA GCGCAGGCCA GCAGGTTGAA
GTGTTGCGTA CTATTACCGT GAAAGAGCAA GGCGCGGTAT GTGATAACGC ATGGGACAAT
GCAACAGTTT ACCTTGGCGG TGAAACAGTT AGTCATGCAG GTAAGAGCTG GTTAGCCGGC
TGGTGGACTC AAGGTGACGA GCCTGGCACA ACGGGTGAGT GGGGCGTTTG GAAAGCACAA
GGTGATAGCG ATTGTGATGG TGGTTTACCA CCGGTTGTTA AACCAAGCCT TGAAGTGACT
GGTATTGCAC CACGTTACGT GCTTGAGCAA GGCAGCGTGA ACATCGAGTT TAGCGCAAGC
GTTAATCAAA CCATGGTGAT CAATGCCAGC TTAGTGCAAG GCAATACAGT GTTTGCTAGC
AGTGAAATGA GCGTTAGCAA CAGTGCGTCA TTCACATTGC TGGCGACCGA TTTAACTGCG
GGGAGTTATG ACATCGTAGT GAACGTCGAA GAGCAACAAC TAAGTAGCCG AACTAGCATC
AATCTAGTAG AAGAAGATAG TGAAGGCGGT GACTATCCTG CTTACGCTGC GGGTACCCAG
TATCAAGCGG GTGATGTGGT GACTAATGCT GGCGGCGTAT TTGAATGTCT GCCTTGGCCA
AACAGTGGCT GGTGTAGCGG CTCAGCAAGC CATTACGCGC CAGGCACCGG CAGTGCTTGG
CAAGATGCCT GGTTTGCTCA TTAA
 
Protein sequence
MKSLKLNLLG ASIALAMGAI SSPAMANGTD MVNPQAGVVV GYWHNWCDGS GYKGGIAPCV 
TLTDVDPQYN VVDVSFMKVY GAVGTIPTFK LDPAIGLSEA QFIEQISELN RQGRSVLIAL
GGADAHIELR NGQEQALADE IIRLVEVYGF DGLDIDLEQA AVTAADNQTV IPAALRIVKD
YYRDQGKNFL ITMAPEFPYL TTGGKYVPYI TELEGYYDWI NPQFYNQGGD GIYIEGLGWI
AQNNDNLKQE FIYHIADALA NGTNGFTKIP HDKLVFGIPT NIDAAATGYI KQPQKLYAAF
EQLKAQGQPL RGVMTWSVNW DMGKNSAGQA YNESFIKAYG PFIHGQDILP PEPDNGKPIF
AGVSNARVKL GAQFDALAGV TARDMEDGDL TSDIQVEGAI DTQTLGLYAL TYRVSDSDDN
LTEQVRTVEV YNTKPEIKGV ANASILLGSA FDAMAGVSAI DAEDGDLTAQ ISVDGDVDTD
TLGQYSLTYR VSDSAGQQVE VLRTITVKEQ GAVCDNAWDN ATVYLGGETV SHAGKSWLAG
WWTQGDEPGT TGEWGVWKAQ GDSDCDGGLP PVVKPSLEVT GIAPRYVLEQ GSVNIEFSAS
VNQTMVINAS LVQGNTVFAS SEMSVSNSAS FTLLATDLTA GSYDIVVNVE EQQLSSRTSI
NLVEEDSEGG DYPAYAAGTQ YQAGDVVTNA GGVFECLPWP NSGWCSGSAS HYAPGTGSAW
QDAWFAH