Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3655 |
Symbol | |
ID | 5664040 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4446808 |
End bp | 4448991 |
Gene Length | 2184 bp |
Protein Length | 727 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641238315 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001503501 |
Protein GI | 157963467 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3469] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAC TAAAACTGAA TCTACTAGGT GCCAGCATTG CGCTTGCTAT GGGGGCTATT TCTTCCCCAG CTATGGCCAA TGGTACCGAT ATGGTAAATC CGCAAGCCGG TGTGGTTGTG GGTTATTGGC ATAACTGGTG CGACGGCTCT GGCTATAAGG GGGGCATTGC ACCTTGTGTA ACCTTAACCG ATGTTGATCC GCAGTATAAC GTGGTCGATG TGTCATTTAT GAAGGTTTAT GGCGCCGTAG GCACGATTCC TACATTTAAA TTAGACCCTG CAATAGGCCT ATCAGAGGCC CAATTTATTG AGCAGATTAG CGAGCTTAAC CGTCAAGGAC GTTCGGTATT AATCGCATTG GGTGGCGCCG ATGCGCACAT CGAACTGCGT AATGGTCAAG AGCAGGCTCT CGCCGATGAA ATTATTCGTC TAGTCGAGGT TTATGGCTTT GACGGCCTAG ATATCGATCT TGAGCAGGCT GCTGTGACCG CTGCCGATAA CCAAACTGTT ATTCCTGCGG CGCTACGCAT AGTTAAAGAT TACTACCGTG ATCAGGGGAA GAACTTCCTA ATCACCATGG CGCCAGAGTT TCCGTATCTG ACAACAGGTG GTAAGTATGT GCCTTATATC ACCGAGCTAG AAGGTTATTA CGACTGGATC AACCCACAGT TCTATAACCA AGGTGGCGAT GGTATTTATA TCGAAGGCCT AGGCTGGATT GCACAGAACA ACGATAACCT TAAGCAAGAG TTTATCTACC ATATCGCCGA TGCCTTAGCG AACGGCACTA ACGGCTTTAC TAAGATCCCC CACGATAAGT TAGTCTTTGG TATTCCAACC AACATCGACG CGGCCGCGAC AGGTTACATC AAACAACCGC AAAAACTCTA TGCGGCATTT GAGCAGCTAA AAGCCCAAGG CCAGCCACTG CGCGGTGTAA TGACGTGGTC GGTTAACTGG GACATGGGGA AAAACTCTGC GGGTCAGGCT TATAACGAGT CATTCATCAA GGCCTACGGT CCATTCATCC ATGGCCAAGA TATTCTGCCT CCAGAGCCGG ATAACGGTAA GCCGATTTTT GCAGGTGTCA GCAATGCTCG CGTTAAACTC GGTGCTCAGT TTGATGCGCT AGCAGGTGTA ACGGCTCGAG ATATGGAAGA TGGCGATTTA ACCTCTGATA TCCAAGTCGA AGGCGCGATT GATACTCAGA CACTAGGTTT GTATGCACTA ACTTATCGTG TTAGCGATAG TGACGATAAC CTAACAGAGC AAGTGCGCAC GGTTGAAGTC TATAACACTA AGCCTGAAAT TAAAGGCGTA GCCAATGCTA GCATTTTACT GGGCAGTGCT TTCGATGCGA TGGCAGGTGT AAGTGCAATC GATGCTGAAG ATGGCGACTT AACGGCGCAA ATTAGCGTCG ATGGTGATGT CGATACCGAC ACTCTTGGTC AGTACTCACT AACTTACCGC GTTAGCGACA GCGCAGGCCA GCAGGTTGAA GTGTTGCGTA CTATTACCGT GAAAGAGCAA GGCGCGGTAT GTGATAACGC ATGGGACAAT GCAACAGTTT ACCTTGGCGG TGAAACAGTT AGTCATGCAG GTAAGAGCTG GTTAGCCGGC TGGTGGACTC AAGGTGACGA GCCTGGCACA ACGGGTGAGT GGGGCGTTTG GAAAGCACAA GGTGATAGCG ATTGTGATGG TGGTTTACCA CCGGTTGTTA AACCAAGCCT TGAAGTGACT GGTATTGCAC CACGTTACGT GCTTGAGCAA GGCAGCGTGA ACATCGAGTT TAGCGCAAGC GTTAATCAAA CCATGGTGAT CAATGCCAGC TTAGTGCAAG GCAATACAGT GTTTGCTAGC AGTGAAATGA GCGTTAGCAA CAGTGCGTCA TTCACATTGC TGGCGACCGA TTTAACTGCG GGGAGTTATG ACATCGTAGT GAACGTCGAA GAGCAACAAC TAAGTAGCCG AACTAGCATC AATCTAGTAG AAGAAGATAG TGAAGGCGGT GACTATCCTG CTTACGCTGC GGGTACCCAG TATCAAGCGG GTGATGTGGT GACTAATGCT GGCGGCGTAT TTGAATGTCT GCCTTGGCCA AACAGTGGCT GGTGTAGCGG CTCAGCAAGC CATTACGCGC CAGGCACCGG CAGTGCTTGG CAAGATGCCT GGTTTGCTCA TTAA
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Protein sequence | MKSLKLNLLG ASIALAMGAI SSPAMANGTD MVNPQAGVVV GYWHNWCDGS GYKGGIAPCV TLTDVDPQYN VVDVSFMKVY GAVGTIPTFK LDPAIGLSEA QFIEQISELN RQGRSVLIAL GGADAHIELR NGQEQALADE IIRLVEVYGF DGLDIDLEQA AVTAADNQTV IPAALRIVKD YYRDQGKNFL ITMAPEFPYL TTGGKYVPYI TELEGYYDWI NPQFYNQGGD GIYIEGLGWI AQNNDNLKQE FIYHIADALA NGTNGFTKIP HDKLVFGIPT NIDAAATGYI KQPQKLYAAF EQLKAQGQPL RGVMTWSVNW DMGKNSAGQA YNESFIKAYG PFIHGQDILP PEPDNGKPIF AGVSNARVKL GAQFDALAGV TARDMEDGDL TSDIQVEGAI DTQTLGLYAL TYRVSDSDDN LTEQVRTVEV YNTKPEIKGV ANASILLGSA FDAMAGVSAI DAEDGDLTAQ ISVDGDVDTD TLGQYSLTYR VSDSAGQQVE VLRTITVKEQ GAVCDNAWDN ATVYLGGETV SHAGKSWLAG WWTQGDEPGT TGEWGVWKAQ GDSDCDGGLP PVVKPSLEVT GIAPRYVLEQ GSVNIEFSAS VNQTMVINAS LVQGNTVFAS SEMSVSNSAS FTLLATDLTA GSYDIVVNVE EQQLSSRTSI NLVEEDSEGG DYPAYAAGTQ YQAGDVVTNA GGVFECLPWP NSGWCSGSAS HYAPGTGSAW QDAWFAH
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