| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3617 |
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| Symbol | |
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| ID | 5664003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4408632 |
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| End bp | 4408919 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641238279 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001503465 |
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| Protein GI | 157963431 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000213527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATCA ACCTGACTGG ACACCACGTC GAAATCACCG ATTCACTGCG CGGTTATGTA
GAAGATAAAT TCACAAAGCT TGAACGACAT TTCGATCAGA TCAATAATGT GCACGTTATT
TTGAATGTAC AAAAGATGCA ACAGATTGCC GAAGCCAAAA TCCACCTTAA GAAAGGGGAA
GTATTTGCCA CTTCGGAACA TGCGGATATG TATGCCGCAA TTGACTCCCT GATCGATAAG
CTCGACCGTC AGGTTATTAA ACACAAAGAG AAACTAATTA AACACTAA
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| Protein sequence | MQINLTGHHV EITDSLRGYV EDKFTKLERH FDQINNVHVI LNVQKMQQIA EAKIHLKKGE
VFATSEHADM YAAIDSLIDK LDRQVIKHKE KLIKH
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