Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3579 |
Symbol | |
ID | 5663965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4369592 |
End bp | 4370854 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238241 |
Product | hypothetical protein |
Protein accession | YP_001503427 |
Protein GI | 157963393 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00756138 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGCCAC TGGCTTTTGC CGCGCCAACT TCGACTGAGA TAACTAAAGA GCAGCGTTCG GGCGAAGAAA CTGTGATTAT AGAATCTGTT TCGCCTAAGG CTACAGCCAA GTCTAAGCAG GGCGATGATA AGCTACCCGA TTATCAAGCA GAGTTTGCAG CGGTGCCTTT CGCTTTTTCC AGTGAAAGTT TAAGTACCGC CTTTGGTGGA GCCGGTGTAC TTAAACACGC CGGGCAGATC CAGTCCTCGA TATTGGGTAT TGGTGTATAT AGCACCAATA ATAGTTGGGT AAGTTACCTG CGTTTTAACG ACTACCAAAT TCCTTCCATT GATCAATGGT TATTCTCGAT AGAAACTTAT CAAGCCCGCT TTCAAGAGGG GGTCTATTAT GTGCCGCAGC AAGCTGGAGC CTTGGGAGAG AACGAGCGAA CAATAACCTT AGGTGATGAA TCTTATACTA AGTTTCATGC CAGATATATT TTGCCAATAG GACGTGGTAG TCAAGGTACT GTGCGTAGCC TTGGGCGTGC AAGAGGCGAT ATTAGTTGGA ACCCACTCGA ATCAGGTGTC ACCAGCCTAA AATTTAGCCC TTTTAGCCAG AGTCGGGAGT TAGAGGGCTT TGAGTTTTTA CCCGAAGAGG CCAAGGGGCT TGCGCTAGAG CTAGATTGGG ATAACCGTGA TAACGGCAAA AATAGTAGTC AAGGCGGACA AACAAGCTTC AAGGTGACTC GCGACTTTGG TAGCGGTTCT CGCAATAGTT GGACCACTTG GGAGTTTGAG CAAAGCGCTT TCGTGTCTAT CGATTCTAAT GAATGGTTTG GTCAGCAAAT TTTAGCGTTT AACTTTTATT TAGCCGATAC GCCAACTTGG ACCTCAGGTT CTGAAGATGA CTTGCATCAA CCCCCTAGTT TTGCAGGGAT AAGCTTAGGC GGATTTGAAC GCCTGCGTGG TTACACCAGC AAGCGTTACA CTGGCCGCTC AGCAGTGCTC TATAGCGCAG AATATCGCGT GCAACCTAGA TGGCAACCAT TGCAAGAGTG GCCAGTATTT AACTTATACG ATGTGCCTTG GTGGCAGTGG GTTGCCTTTG CTGAGGCGGG GCAGGTGAGT GATGACTTTA ATGCCAGCGC GTTACATGAA GATTTGAAGT GGTCGGCAGG TTTTGGAGCG CGATTTGAAG TTGAAAGTAT CGTAGTGCGT GCAGAGCTTG CTTTTAGCGC CGAATCGAAT CAATTCTGGA TCATGGTGAA TCAACCATTC TAA
|
Protein sequence | MSPLAFAAPT STEITKEQRS GEETVIIESV SPKATAKSKQ GDDKLPDYQA EFAAVPFAFS SESLSTAFGG AGVLKHAGQI QSSILGIGVY STNNSWVSYL RFNDYQIPSI DQWLFSIETY QARFQEGVYY VPQQAGALGE NERTITLGDE SYTKFHARYI LPIGRGSQGT VRSLGRARGD ISWNPLESGV TSLKFSPFSQ SRELEGFEFL PEEAKGLALE LDWDNRDNGK NSSQGGQTSF KVTRDFGSGS RNSWTTWEFE QSAFVSIDSN EWFGQQILAF NFYLADTPTW TSGSEDDLHQ PPSFAGISLG GFERLRGYTS KRYTGRSAVL YSAEYRVQPR WQPLQEWPVF NLYDVPWWQW VAFAEAGQVS DDFNASALHE DLKWSAGFGA RFEVESIVVR AELAFSAESN QFWIMVNQPF
|
| |