Gene Spea_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3579 
Symbol 
ID5663965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4369592 
End bp4370854 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content47% 
IMG OID641238241 
Producthypothetical protein 
Protein accessionYP_001503427 
Protein GI157963393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00756138 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCAC TGGCTTTTGC CGCGCCAACT TCGACTGAGA TAACTAAAGA GCAGCGTTCG 
GGCGAAGAAA CTGTGATTAT AGAATCTGTT TCGCCTAAGG CTACAGCCAA GTCTAAGCAG
GGCGATGATA AGCTACCCGA TTATCAAGCA GAGTTTGCAG CGGTGCCTTT CGCTTTTTCC
AGTGAAAGTT TAAGTACCGC CTTTGGTGGA GCCGGTGTAC TTAAACACGC CGGGCAGATC
CAGTCCTCGA TATTGGGTAT TGGTGTATAT AGCACCAATA ATAGTTGGGT AAGTTACCTG
CGTTTTAACG ACTACCAAAT TCCTTCCATT GATCAATGGT TATTCTCGAT AGAAACTTAT
CAAGCCCGCT TTCAAGAGGG GGTCTATTAT GTGCCGCAGC AAGCTGGAGC CTTGGGAGAG
AACGAGCGAA CAATAACCTT AGGTGATGAA TCTTATACTA AGTTTCATGC CAGATATATT
TTGCCAATAG GACGTGGTAG TCAAGGTACT GTGCGTAGCC TTGGGCGTGC AAGAGGCGAT
ATTAGTTGGA ACCCACTCGA ATCAGGTGTC ACCAGCCTAA AATTTAGCCC TTTTAGCCAG
AGTCGGGAGT TAGAGGGCTT TGAGTTTTTA CCCGAAGAGG CCAAGGGGCT TGCGCTAGAG
CTAGATTGGG ATAACCGTGA TAACGGCAAA AATAGTAGTC AAGGCGGACA AACAAGCTTC
AAGGTGACTC GCGACTTTGG TAGCGGTTCT CGCAATAGTT GGACCACTTG GGAGTTTGAG
CAAAGCGCTT TCGTGTCTAT CGATTCTAAT GAATGGTTTG GTCAGCAAAT TTTAGCGTTT
AACTTTTATT TAGCCGATAC GCCAACTTGG ACCTCAGGTT CTGAAGATGA CTTGCATCAA
CCCCCTAGTT TTGCAGGGAT AAGCTTAGGC GGATTTGAAC GCCTGCGTGG TTACACCAGC
AAGCGTTACA CTGGCCGCTC AGCAGTGCTC TATAGCGCAG AATATCGCGT GCAACCTAGA
TGGCAACCAT TGCAAGAGTG GCCAGTATTT AACTTATACG ATGTGCCTTG GTGGCAGTGG
GTTGCCTTTG CTGAGGCGGG GCAGGTGAGT GATGACTTTA ATGCCAGCGC GTTACATGAA
GATTTGAAGT GGTCGGCAGG TTTTGGAGCG CGATTTGAAG TTGAAAGTAT CGTAGTGCGT
GCAGAGCTTG CTTTTAGCGC CGAATCGAAT CAATTCTGGA TCATGGTGAA TCAACCATTC
TAA
 
Protein sequence
MSPLAFAAPT STEITKEQRS GEETVIIESV SPKATAKSKQ GDDKLPDYQA EFAAVPFAFS 
SESLSTAFGG AGVLKHAGQI QSSILGIGVY STNNSWVSYL RFNDYQIPSI DQWLFSIETY
QARFQEGVYY VPQQAGALGE NERTITLGDE SYTKFHARYI LPIGRGSQGT VRSLGRARGD
ISWNPLESGV TSLKFSPFSQ SRELEGFEFL PEEAKGLALE LDWDNRDNGK NSSQGGQTSF
KVTRDFGSGS RNSWTTWEFE QSAFVSIDSN EWFGQQILAF NFYLADTPTW TSGSEDDLHQ
PPSFAGISLG GFERLRGYTS KRYTGRSAVL YSAEYRVQPR WQPLQEWPVF NLYDVPWWQW
VAFAEAGQVS DDFNASALHE DLKWSAGFGA RFEVESIVVR AELAFSAESN QFWIMVNQPF