Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3567 |
Symbol | |
ID | 5663953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4354179 |
End bp | 4354916 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641238229 |
Product | enoyl-CoA hydratase/isomerase |
Protein accession | YP_001503415 |
Protein GI | 157963381 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0488343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACGA TTCAGGTTAA GGACGATAAT GGGGTACGTA TCATTACGTT TAATCGTCCG GATAAGCGTA ACGCGCTTAA CCTACAAATG TATACACAAC TAACAGAATA CCTTATCCAA GGTGAGTCGG ACAATGAAAT TCGAGCCTTT ATGTTTCGTG GCCAAGATGA TTGTTTTACT TCAGGTAATG ATGTCGCAGA CTTCCTACAA AATAGTGGCT TAGGAGCCCA ACATCCTGCT TTTCGTTTCC TCTTCTGCCT ACTCGATCTA CAAAAGCCTG TTGTGGCCGC CGTCACTGGC GCCGCCGTCG GCATTGGCAC CACCATGCTA CTGCATTGCG ATTTAGTTTA TGCGGACCAG AGCGCCAAGT TTCAACTACC ATTCGTGCAG CTTGCATTAG TCCCTGAAGC GGGAGCTAGC CTATTGCTAC CTCAGGTTAT TGGTCAGGCA AAAGCCAGTG AGCTATTAAT GTTAGGTGAG AGCTTTAATG CTGTTCAAGC CCAAAGCTAT GGACTTATTA ATGACGTTAT CGACAGCGAG ACTATTTTTG AGTACGCCTT GAGTCGTGCA CATCAGTTAG CGACGCTGCC ACCCATATCG CTACAAACTA CCAAAAAATT AATTCGCTAT AACAGGGAAG AAGTGCGAGC GCAGATGAAG AAAGAGCTTA TCGAATTTGA AGCCAGGCTG GCAAGTGACG AAGCCAAAGC AAGATTTGCT GCGTTTTTAA AACGTTAA
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Protein sequence | MSTIQVKDDN GVRIITFNRP DKRNALNLQM YTQLTEYLIQ GESDNEIRAF MFRGQDDCFT SGNDVADFLQ NSGLGAQHPA FRFLFCLLDL QKPVVAAVTG AAVGIGTTML LHCDLVYADQ SAKFQLPFVQ LALVPEAGAS LLLPQVIGQA KASELLMLGE SFNAVQAQSY GLINDVIDSE TIFEYALSRA HQLATLPPIS LQTTKKLIRY NREEVRAQMK KELIEFEARL ASDEAKARFA AFLKR
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