Gene Spea_3567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3567 
Symbol 
ID5663953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4354179 
End bp4354916 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content46% 
IMG OID641238229 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001503415 
Protein GI157963381 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0488343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGA TTCAGGTTAA GGACGATAAT GGGGTACGTA TCATTACGTT TAATCGTCCG 
GATAAGCGTA ACGCGCTTAA CCTACAAATG TATACACAAC TAACAGAATA CCTTATCCAA
GGTGAGTCGG ACAATGAAAT TCGAGCCTTT ATGTTTCGTG GCCAAGATGA TTGTTTTACT
TCAGGTAATG ATGTCGCAGA CTTCCTACAA AATAGTGGCT TAGGAGCCCA ACATCCTGCT
TTTCGTTTCC TCTTCTGCCT ACTCGATCTA CAAAAGCCTG TTGTGGCCGC CGTCACTGGC
GCCGCCGTCG GCATTGGCAC CACCATGCTA CTGCATTGCG ATTTAGTTTA TGCGGACCAG
AGCGCCAAGT TTCAACTACC ATTCGTGCAG CTTGCATTAG TCCCTGAAGC GGGAGCTAGC
CTATTGCTAC CTCAGGTTAT TGGTCAGGCA AAAGCCAGTG AGCTATTAAT GTTAGGTGAG
AGCTTTAATG CTGTTCAAGC CCAAAGCTAT GGACTTATTA ATGACGTTAT CGACAGCGAG
ACTATTTTTG AGTACGCCTT GAGTCGTGCA CATCAGTTAG CGACGCTGCC ACCCATATCG
CTACAAACTA CCAAAAAATT AATTCGCTAT AACAGGGAAG AAGTGCGAGC GCAGATGAAG
AAAGAGCTTA TCGAATTTGA AGCCAGGCTG GCAAGTGACG AAGCCAAAGC AAGATTTGCT
GCGTTTTTAA AACGTTAA
 
Protein sequence
MSTIQVKDDN GVRIITFNRP DKRNALNLQM YTQLTEYLIQ GESDNEIRAF MFRGQDDCFT 
SGNDVADFLQ NSGLGAQHPA FRFLFCLLDL QKPVVAAVTG AAVGIGTTML LHCDLVYADQ
SAKFQLPFVQ LALVPEAGAS LLLPQVIGQA KASELLMLGE SFNAVQAQSY GLINDVIDSE
TIFEYALSRA HQLATLPPIS LQTTKKLIRY NREEVRAQMK KELIEFEARL ASDEAKARFA
AFLKR