Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3542 |
Symbol | mutL |
ID | 5663928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4324926 |
End bp | 4326812 |
Gene Length | 1887 bp |
Protein Length | 628 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641238198 |
Product | DNA mismatch repair protein |
Protein accession | YP_001503390 |
Protein GI | 157963356 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0323] DNA mismatch repair enzyme (predicted ATPase) |
TIGRFAM ID | [TIGR00585] DNA mismatch repair protein MutL |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATAG AAAAATTACC GCCACAATTA GCTAATCAGA TCGCCGCAGG TGAGGTGGTC GAACGTCCTG CATCTGTGAT TAAAGAGCTG GTTGAAAACA GTCTCGATGC AGGGGCTACA CGCGTCGATA TCGAGATTGA AAAAGGCGGC GCTAAACTTA TTCGGATCCG CGATAATGGC TCAGGGATCC CAAAAGAAGA TCTGAGTCTA GCTTTGTCTC GACATGCCAC GTCCAAGCTT AAATCGCTGG ATGATTTAGA GGCTATTTTG AGCTTTGGTT TTCGCGGCGA AGCGTTAGCG AGTATTAGCT CTGTTTCGCG GCTTATCTTA ACCTCACGAA CAGCCGAGCA AACAGAGGCC TGGCAAGCGC ACGCCGAGGG TACCGAGATG GCCGTTAAGG TATTACCAGC GGCTCATCCT GTCGGTTCAA CTGTCGAAGC TGTGGATTTG TTTTTTAATA CCCCAGCAAG GCGTCGTTTC TTAAAGAGTG ATAAGACAGA GTTCACCCAT ATTGATGAGT GGCTCAAGCG TATAGCTTTG GCTAGGCGTG ATATCCATTT CACCTTAAAA CACAACGGTA AGACGGTACG CAATTACCGT CCTGCGAATA CCGAGATTCA GTATATTCAG CGCTTGGGGC AAATCTGCGG TAAAGCATTC GCAGAAACCT GCCTGCGTAT AGAGTGTGAG CATAATGACT TAAAACTAAG TGGTTACTTA CAATCACCTA GTGCTGCTAG CGGCTACAGT GAGACCCAGT ATTTCTATGT GAATGGTCGC CTAGTAAAAG ACAGACTGGT TAATCACGCC GTTCGTCAGG CGTTTTCGCA ATATGCCGAG GGTATTTCTC CTGGTTACGT GCTGATGCTA GAGCTTGACC CGCATCAAGT GGATGTGAAC GTACATCCGG CAAAACATGA GGTACGTTTT CATCAGAGTC GTTACGTACA CGACTATATT TTACAAGCCC TGCAGTCGGC GATGGCGCAA TCGACTCAAC TTAGTGTTGA TATAGAACCA GAGTCCGAAC AGACTACTGC ATGGCAAACA AGCCCGACGC GAGGAGCTGT AGCACCGTCT CACTACGTTG ACGAATCGAA GAGTAAGCCA TCGGCAGTGT TCGATGTACG TGAAAGACAC TCAAGCGCCA GTCAAGCGGG TTACTCAGGG GGCGGGGGGA GTTATAGGAG TCAACTTAAA CCAGCTTCTA GAAACTCCGA GGTAAGTTTA CCCTCTCAGA CGAGTATTCG TGCATATGGT GAGCTCTTGA GTACTGACTC TGTTCAGACT CAAAGCACGA ATGTGCCTCT ACGTCCAGCA GCTCATCAAG CCGGCATGAT GTCTACCTCT CATGGGGCGG CGAGTATGCC GCCAGTCATA GCGGGCCAAT ACTGGGTGCT AGTTAAAGAG GATAAAATAT CTCTGCTGGA TATTGCCATG GTAGCAAAGG CGGCATTGAA AGCAGAAATA GCAGCCAAGC TTGCACAAGG TATAATTGGC CAACCTTTAT TGATGCCTGT AGCGATTAGT GTTGATGATG ATTGGCCTGA GATTATCGAT AATCGTGAGC AGTTATTACG AAAGTTGGGA ATAGAGCTCT CTATTCGTCT CGGGCAGTTG ATTATTAAGA AAGTGCCCCC ATATCTAAGA GATAGTCAAC TGGCAGCCTT AATCCCTGAA TTACTAGAGT GGATTAGATT AGAATTACCA AGCGATGCCG CTGTTATAAA GTGGCTTGCA GAGCAAGCAG CAAACCGATT TACTTCGGCC AGTGAGGCAT GGTTTGCCTT CAGTGCATTG CCGGATGATG TGCAGTGTGA GCTTTATAAT CACTCCCAAG AGTTACCTTG GGAGCAATGG ATGAAAGAAA ATCAGAGTGA CCGATAA
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Protein sequence | MAIEKLPPQL ANQIAAGEVV ERPASVIKEL VENSLDAGAT RVDIEIEKGG AKLIRIRDNG SGIPKEDLSL ALSRHATSKL KSLDDLEAIL SFGFRGEALA SISSVSRLIL TSRTAEQTEA WQAHAEGTEM AVKVLPAAHP VGSTVEAVDL FFNTPARRRF LKSDKTEFTH IDEWLKRIAL ARRDIHFTLK HNGKTVRNYR PANTEIQYIQ RLGQICGKAF AETCLRIECE HNDLKLSGYL QSPSAASGYS ETQYFYVNGR LVKDRLVNHA VRQAFSQYAE GISPGYVLML ELDPHQVDVN VHPAKHEVRF HQSRYVHDYI LQALQSAMAQ STQLSVDIEP ESEQTTAWQT SPTRGAVAPS HYVDESKSKP SAVFDVRERH SSASQAGYSG GGGSYRSQLK PASRNSEVSL PSQTSIRAYG ELLSTDSVQT QSTNVPLRPA AHQAGMMSTS HGAASMPPVI AGQYWVLVKE DKISLLDIAM VAKAALKAEI AAKLAQGIIG QPLLMPVAIS VDDDWPEIID NREQLLRKLG IELSIRLGQL IIKKVPPYLR DSQLAALIPE LLEWIRLELP SDAAVIKWLA EQAANRFTSA SEAWFAFSAL PDDVQCELYN HSQELPWEQW MKENQSDR
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