| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3538 |
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| Symbol | |
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| ID | 5663924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4321121 |
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| End bp | 4322272 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238194 |
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| Product | HflK protein |
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| Protein accession | YP_001503386 |
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| Protein GI | 157963352 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0107822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTGGA ACGAGCCCGG TAACAAGGGT CAAGACCCTT GGGGAAATGG CAATAAAGGT
GGTAATGATA AAGGACCACC AGATTTAGAT GAAGTTTTTC GTAACCTTTC TAAGCGCTTC
GGTGGCAAGG GTAATGGTTC TGGAGGCAGC ATTAGTGCGG CCAGCTTAAT CATTGTTCTA
GTTATCGCAA TAGTTGTATG GGGACTTTCA GGTTTCTATA CGGTTAAAGA AGCTGAGAAA
GGTGTTGCTC TTCGTTTTGG CGAATATATC GGGGAAGTCG ATCCAGGCCT TCAATGGAAA
GCCACTTTTA TTGATGAAGT GACGCCTGTA AACGTACAAA CGGTTCGTTC TATTCCAGCT
TCTGGAAGTA TGCTAACAGC CGACGAAAAC GTTGTCCTTG TTCAACTAGA TGTGCAGTAT
CGAGTGAGTA ACGCGAAAGA TTACCTCTAT AGCGTAGTCG ATGCAGATGC GAGTTTGCGT
GAGGCGACAG ATAGCGCGCT ACGTTACGTT ATCGGCCATA ACACTATGGA TGATATCTTG
ACTACTGGTC GTGATAAAAT TCGTCGTGAC ACATGGGACG AAATCGAGCG AATTATCAAA
CCGTATAAAC TCGGTATTTC AGTTGTTGAT GTGAACTTCT TGCCAGCTCG TCCACCAGAA
GAGGTGAAAG ATGCCTTCGA TGATGCGATT GCAGCACAAG AGGATGAGCA ACGTTTCATT
CGTGAAGCTG AAGCTTACTC ACGTCAGTTA GAGCCAAAGG TTCGTGGTAC TGTACAGCGC
ATGGATCAAC AAGCGATTGC TTATAAGCAG CGAGTGATTT TAGAAGCGAA AGGTAAAGTA
GCTCGTTTCG AACAGTTACT GCCTGAGTAT CAAGCGGCGC CAGAAGTGAC TCGCGAACGT
ATGTACTTTG ATACGATGCA GGAAGTTATG AGTGGCACCA ATAAAGTTCT TATCGATGCC
AAGAATAGTG GTAACTTGAT GTATTTACCA TTAGACAAGT TGATGCAGAA TAGCCAGTCG
CATAAGTCTG CCAGCACTAA TACTAAACCG GCAAAGCCTG CGATGTCAGT TAATAGTACA
ACTCACACTA ACAGCAGCAT TCCTCTCGAT GGTCGCCCAT CTAGAGGTGA ACGTTCGTTG
GGGAGGAACT AA
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| Protein sequence | MAWNEPGNKG QDPWGNGNKG GNDKGPPDLD EVFRNLSKRF GGKGNGSGGS ISAASLIIVL
VIAIVVWGLS GFYTVKEAEK GVALRFGEYI GEVDPGLQWK ATFIDEVTPV NVQTVRSIPA
SGSMLTADEN VVLVQLDVQY RVSNAKDYLY SVVDADASLR EATDSALRYV IGHNTMDDIL
TTGRDKIRRD TWDEIERIIK PYKLGISVVD VNFLPARPPE EVKDAFDDAI AAQEDEQRFI
REAEAYSRQL EPKVRGTVQR MDQQAIAYKQ RVILEAKGKV ARFEQLLPEY QAAPEVTRER
MYFDTMQEVM SGTNKVLIDA KNSGNLMYLP LDKLMQNSQS HKSASTNTKP AKPAMSVNST
THTNSSIPLD GRPSRGERSL GRN
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