Gene Spea_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3533 
SymbolsspA 
ID5663919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4316590 
End bp4317219 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content45% 
IMG OID641238189 
Productstringent starvation protein A 
Protein accessionYP_001503381 
Protein GI157963347 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0362173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTG CTGCCAATAA ACGCTCAATC ATGACCCTGT ATTCAGGTGC AGACGACCTT 
TATAGCCATC AAGTTCGTAT CGTTCTTGCT GAAAAAGGTG TTACGGTTGA TGTACTACAG 
GTTGATCCTA ATGAGATCCC TGAAGACTTG ATCGAGCTAA ACCCATACAA CACAGTGCCA 
ACTTTGGTAG ACAGAGAGCT AGTTCTTTAT AACTCTCGTA TCATTATGGA GTATCTAGAT 
GAGCGTTTCC CTCATCCTCC ACTAATGCCT GTTTATCCGG TTTCACGTGG CCAAACACGT 
CTTTGGATGC ACCGCATCGA AGAAGACTGG TATGCCCTTG TTGAGCGTAT TCGCAAAGGC 
GATCGTGCTG ATGCGGCTCG TAAAGAGCTT CAAGAAGGTC TTACTGCTAT CGCGCCAATC 
TTCGGTGAAG TGCCTTACTT CATGAGCGAA GAATTTGGCC TAGCAGATTG CTATCTTGGT 
CCATTATTGT GGCGCCTACC AGTATTAGGC ATCGAACTTG ATAGCCGTAC TGCTAAAGAT 
ATCAAAGCTT ACATGACACG TTTATTCGAT CGTGAATCAT TTAAAGCTTC TCTAACTGAG 
ACTGAGCGCG AAATGCGCAT GGGTATCTAA
 
Protein sequence
MAVAANKRSI MTLYSGADDL YSHQVRIVLA EKGVTVDVLQ VDPNEIPEDL IELNPYNTVP 
TLVDRELVLY NSRIIMEYLD ERFPHPPLMP VYPVSRGQTR LWMHRIEEDW YALVERIRKG 
DRADAARKEL QEGLTAIAPI FGEVPYFMSE EFGLADCYLG PLLWRLPVLG IELDSRTAKD 
IKAYMTRLFD RESFKASLTE TEREMRMGI