| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3521 |
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| Symbol | |
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| ID | 5663907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4305077 |
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| End bp | 4305715 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238177 |
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| Product | TonB family protein |
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| Protein accession | YP_001503369 |
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| Protein GI | 157963335 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCATAG TCGTCCATAG AGCCTTGGTT ATTAGTGCAC GGTTTTTGCT GTCTATAGTC
GTAACGATAC TGCTCTGTTA TTACTTGCCT AACAGCCTCA ATGATAATCA ACCAAGGCAG
TTCCTTGCCA AGCAAACTAA GGAGCTACCT CTGCCGCTGT TGCCACCTGA AAAACCTAAA
ATACCAACGG CAAAAGAGGT GCAAAGCAAA CCAGTAACTG CAAACGCCGC AACACCAGTG
TCCACTAGCA TACCGATTAT GCCAACGGTT GCAGATATGC CGTTGCAGGT GCCTATTATG
GCGGTTCCGA CAGTTAATAG TTTAAGTCTG CCAAGCATTA CACCTGTTAT AGCAGGAATT
AAAGATGTCG ACAAAGCGCC AGAGTTATTA CGTTTTATTC AACCTAAAAT GCCGTTGGCT
GGGCGCAAGT TTAAGCAAGG TGGCAGAGTG CTGTTACGGC TCATAGTGGA GGCTGATGGT
GTCGTTAGCC AAGCAGAAGT GTTAGAAGCT AAACCTAAGC AAGTGTTTGA CCAGTCAGCA
ATTGAGGCTG CACGAAAGTG GCGATTTAAA CCAGCCGTTT TATCTGGTGA AGCGGTGAAA
GTCTTTGTTG ATGTACCGAT TAACTTTAAG GTTGGTTAA
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| Protein sequence | MSIVVHRALV ISARFLLSIV VTILLCYYLP NSLNDNQPRQ FLAKQTKELP LPLLPPEKPK
IPTAKEVQSK PVTANAATPV STSIPIMPTV ADMPLQVPIM AVPTVNSLSL PSITPVIAGI
KDVDKAPELL RFIQPKMPLA GRKFKQGGRV LLRLIVEADG VVSQAEVLEA KPKQVFDQSA
IEAARKWRFK PAVLSGEAVK VFVDVPINFK VG
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