Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3511 |
Symbol | |
ID | 5663897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4290267 |
End bp | 4290941 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641238167 |
Product | two component transcriptional regulator |
Protein accession | YP_001503359 |
Protein GI | 157963325 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000699106 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC TTCTTGTTGA AGACAACACC TTATTAGTCG AAGAGCTAGT GAAACAGCTT AAACAGGCTG GTTATGTTAC TGACAGCACA GATAAAGTCA GTGAAGCAGA TTATCTAATC AAAGAAACCA ACTACGACTG CGTCATTCTC GATATTGGCC TACCAGACGG TAATGGCCTA GAACTGCTTG AAAGCTGGCG TGAGCAAGGT ATCCATACCC CTGTGATTAT GCTGACCGCA CGCAGCCAGT GGCATGAAAA AGTCGAAGGG TTTAACTCGG GCGCAGACGA TTATCTAGGT AAGCCATTCC ATACCCAAGA GTTGCTGGTT CGCATTCAGG CTCTTATTCA GCGTGCGCAC GGCAAGGCTA ACACCCCTAA CAAGCAGCTC ACCTATGCAG GCGTAGCTCT CGATGAGGGG CAGCAATCGG TAACAGTTGG CGAGCAAACG TTTGAGCTTA CGGCCATGGA GTTTAGGTTA CTCAAGATCT TCCTGATGTC TCCTAAAAAG CTCCTGTCTA AGGCACAACT GACTGACAAG CTTTATCAGT TTGACGATGA AAAAGAGAGT AATGTGGTTG AAGTTTACGT GACCCACTTA CGTAAGAAGC TTGGCAAAAC CGCCATCGAA ACTCGTCGTG GCCAAGGGTA TATCTTTCAC GGCCTAACCC AATGA
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Protein sequence | MKLLLVEDNT LLVEELVKQL KQAGYVTDST DKVSEADYLI KETNYDCVIL DIGLPDGNGL ELLESWREQG IHTPVIMLTA RSQWHEKVEG FNSGADDYLG KPFHTQELLV RIQALIQRAH GKANTPNKQL TYAGVALDEG QQSVTVGEQT FELTAMEFRL LKIFLMSPKK LLSKAQLTDK LYQFDDEKES NVVEVYVTHL RKKLGKTAIE TRRGQGYIFH GLTQ
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