Gene Spea_3502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3502 
Symbol 
ID5663888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4281835 
End bp4282308 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID641238158 
Producthypothetical protein 
Protein accessionYP_001503350 
Protein GI157963316 
COG category[S] Function unknown 
COG ID[COG5589] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02444] conserved hypothetical protein TIGR02444 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATTGT CTAACCGTTT ATCTCTTAGC TTGTGGAGTG ATTGCGACCC CCTCTATATG 
CAGCATCAGA GTCTGTGTTT ACAATTGCAA GATGACCACC AGCTCAATGT CAATTTGCTG 
CTATTAGCCC TTTGGCTCGA TATGCATCAC TACTTACTGC CCAAGCTACA ATGGCGTCAA 
CTACAGCAAG ACACTCACAG CTGGGAAAGG AAGCTGTTAC TGCCCTACAG ACAATTAAGA 
CGCCAAAGCA AAGCCTGTCT TGCAACAGGC GAATACCGAC AGATGTTAGA GCTAGAGCTG 
ATGTTGGAGC GAAAATCTCA GGCGATGATT TTAACTGCAC TCAAACTTAT GCCGCTAGAA 
GAGCAAACAA GCACTAGTAC TAATATAAGT AGTTACCATA ACCTCAGCCA TTATTTAGCC 
CTGTTTAATT TAGATAGCCG CAATTACCCC TCATTGCAGA GCGCTTCACA ATAG
 
Protein sequence
MTLSNRLSLS LWSDCDPLYM QHQSLCLQLQ DDHQLNVNLL LLALWLDMHH YLLPKLQWRQ 
LQQDTHSWER KLLLPYRQLR RQSKACLATG EYRQMLELEL MLERKSQAMI LTALKLMPLE 
EQTSTSTNIS SYHNLSHYLA LFNLDSRNYP SLQSASQ