Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3487 |
Symbol | |
ID | 5663873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4258965 |
End bp | 4259645 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641238143 |
Product | hypothetical protein |
Protein accession | YP_001503335 |
Protein GI | 157963301 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1392] Phosphate transport regulator (distant homolog of PhoU) |
TIGRFAM ID | [TIGR00153] conserved hypothetical protein TIGR00153 |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000126131 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTAA ACTCTATTTT AGGCGTGTTT GCAAAATCGC CAATTAAGCC TCTTCAAGAG CATATCGACA AAGTATACGA CTGTGCGTCA TTACTTGTCC CATTTTTTGA AGCTACTGTC GCAGGAGACT GGGACAAAGC CGTTCAATTG CGTAAGCAAA TTAGCTTTGC AGAGCAAGAA GCTGACTCAC TAAAACGTGA GATCCGCCTA ACTCTGCCTG GCGGTCTGTT TATGCCTGTT GAGCGCACTG ACTTACTGGA GCTACTTACC CAGCAAGATA AGATTGCTAA CAAAGCAAAA GACATTTCCG GCCGCGTCAT TGGCCGACAG TTAGAGTTAC CTCTAGTCAT TCAAGAACCA TTTATTGCTT ATTTACAGCG CTGCCTTGAT GCAGTTTCTC TGTCAAAAGA AGCAATTAAC GAACTCGATG ATCTGTTAGA AACAGGTTTT AGAGGTCGTG AAGTGGATCT TGTCGCTAAA ATGATCGCAG AGTTAGATTC TATCGAAGAA GATACTGATG ATTTACAGAT TAAGATCCGT AGACAGCTTT TCTCCATCGA GTCTGAATTA AGCCCTGTAG ATGTAATGTT CCTCTACAAG ATAATTGAGT GGGTTGGTGA CTTGGCAGAT CTTGCTGAAC GAGTCGGTTC TCGCTTAGAG CTAATGTTAG CTCGCGTCTA A
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Protein sequence | MPVNSILGVF AKSPIKPLQE HIDKVYDCAS LLVPFFEATV AGDWDKAVQL RKQISFAEQE ADSLKREIRL TLPGGLFMPV ERTDLLELLT QQDKIANKAK DISGRVIGRQ LELPLVIQEP FIAYLQRCLD AVSLSKEAIN ELDDLLETGF RGREVDLVAK MIAELDSIEE DTDDLQIKIR RQLFSIESEL SPVDVMFLYK IIEWVGDLAD LAERVGSRLE LMLARV
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