Gene Spea_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3419 
Symbol 
ID5663805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4177785 
End bp4179035 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content47% 
IMG OID641238075 
Productmajor facilitator transporter 
Protein accessionYP_001503267 
Protein GI157963233 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID[TIGR00896] cyanate transporter 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTAT CGCATCCTTC TCGTTTTGCC AGCAGTGCAT TCTTGCTACT TGGCGTACTC 
TTAATCGCTA TCAGCTTACG CAGCCCAATC ACTGGCGTAG GACCGCTACT CGATGCCATT
AGAGCCGAAT TACACCTGTC TGCAACACAG GCCGGAATGC TAACAACATT ACCATTATTA
GCCTTTGCTT TTTTCTCACC TGTAGCCTCT AAAATCGGTG CAAAACGCGG CCTAGAACAG
GGGCTAATGC TGTCGTTACT ATTTATCCTT ACTGGTCTAG TGGTACGTTC ACTCGGTTCT
ACCAGCGCGC TATTTATCGG CACTGTGGTC ATTGGTGCGG GAATCGCCTT CGCAAACGTA
CTACTGCCAA GCTTAATGAA ACGTGACTTC CCGACTCGAA TAACCACCAT GACCTCCATG
TATGTATTGA TGATGGGGGC AGGATCAGCC ATGAGTGCCA GTCTAGCCAT TCCATTGACT
GAGATGGCTA ATCAATTGTC GATAACTGTG ATCCCAAGTT GGGCATTTGC CTTAGGGGCT
CTCGTGATAT TCCCATTAAT TGCGATTATA GTTTGGTTAC CACAAATGCG TAATCACACC
GCGCCAAGTC AAGATACCCA AGCATTCGAT AGTCACAGTT ATCTGTGGCG TAATGCTAGC
GCCTGGCAGA TCACGCTGTT TTTGGCGCTC AATTCCTTCT TGATGTATAT CTTTATCAGC
TGGTTGCCGA CAATATTGGT AGACAGTGGC TTTAGCCATC ATGAAGCAGG TGTGATCCAC
GGTGTGCTAC AGCTATTTAC AGCGGTACCC GCCTTAGTTT TAATTCCGTT TATGAATAAG
TTTAACGATA AACGCCTGCT CAGCTTGAGC CTAACTTTGA TGGCATTGAT AGGCATTATA
GGGCTAATCG TTAAACCTGA GTTTGCCATG ATTTGGGGAA TGCTATTTGG CTTTGGGGCT
GGTGGTGGAT TTATTGTGGC GCTAGCCTTA ATAAGCCTTC GAACCACTAG TGCACAGCAA
GCGGCCACAT TATCGGGCAT GGCACAATTC TTAGGTTACT TACTCGCTGC TACGGGCCCA
ATGATAATTG GCGAGTTACA TGAGCTGACT GCTAACTGGC AGATACCGCT TATGCTCTGC
GCTTTCTGCG CTGTGCTATG GAGTGTGTTC TCGGTTTTTG CGGCAAAGGA TGAGCTCATC
ACCCCCTCAG AACATGATAC CCCTGCCCCA TTGGTCGAAA ACCTCTCATA A
 
Protein sequence
MTLSHPSRFA SSAFLLLGVL LIAISLRSPI TGVGPLLDAI RAELHLSATQ AGMLTTLPLL 
AFAFFSPVAS KIGAKRGLEQ GLMLSLLFIL TGLVVRSLGS TSALFIGTVV IGAGIAFANV
LLPSLMKRDF PTRITTMTSM YVLMMGAGSA MSASLAIPLT EMANQLSITV IPSWAFALGA
LVIFPLIAII VWLPQMRNHT APSQDTQAFD SHSYLWRNAS AWQITLFLAL NSFLMYIFIS
WLPTILVDSG FSHHEAGVIH GVLQLFTAVP ALVLIPFMNK FNDKRLLSLS LTLMALIGII
GLIVKPEFAM IWGMLFGFGA GGGFIVALAL ISLRTTSAQQ AATLSGMAQF LGYLLAATGP
MIIGELHELT ANWQIPLMLC AFCAVLWSVF SVFAAKDELI TPSEHDTPAP LVENLS