Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3374 |
Symbol | |
ID | 5663761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 4121391 |
End bp | 4122227 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641238031 |
Product | periplasmic binding protein |
Protein accession | YP_001503223 |
Protein GI | 157963189 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.610729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAG TTACCAGATT ATTTATGTTA CTGACGGCTT GTGCTTTACC ATCAGCTTTT GCGCATGCTG ATATCGCTGC GCCCGCTAAA CGTATTATCG CGCTTTCACC ACACTCGGTT GAGATGCTGT ATGCCATTGG CGCGGGGGAG GCGATTGTGG CGACCACAGA TCATGCTGAT TTCCCCGAGG CAGCTCTCGC CATTCCGCGT ATTGGCGGAT ATCACGGGGT GCAAGTCGAG CGCATACTGG AGCTAGAGCC CGATCTCGTG GTGGTATGGG GCAGTGGCAA TAAAGTCGAA GACATTACCC GTATTAAAGC GCTAGGTTTT CGGGTGTTCG ATAGTAACCC TGACACGCTC GATGAGGTGG CCGATGAGCT TGAGTCTCTG GGAGAGCTAA CTGGGCATCA AGTCCTGGCT GCAAAAGTGG CTGCCGATTA CCGTCAGCAA CTTAAGCAAT TACGTAGCGA GAATCTTGCC AAGTCAGGGG TGAATGTCTT CTATCAACTC TGGTCGACCC CGCTTATGAC CGTCGCCAAG GATAGCTGGA TCCAGCAAAT CATTTCAGTG TGTCACGGTG ATAACGTCTT TGCTGATGCG GCTAACGATT ACCCACAAGT CAGCTTAGAA ACTGTGGTGC TTAAGCAGCC CGAAGTGATC TTACAGAGCC AAGATGAAGG CAACATCTTA GGTGTAGACT GGAGCGCGTG GCCTGAGATC CCTGCGGTTA AAAATAAGCA TATTTATCAG CTTAACGCCG ACCTACTCCA CCGCGCGGCC CCTAGAGCCT TGCTTGGCGT AGAGGCGCTA TGTGATGCGT TAGATAAGGC GCGTTAA
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Protein sequence | MNRVTRLFML LTACALPSAF AHADIAAPAK RIIALSPHSV EMLYAIGAGE AIVATTDHAD FPEAALAIPR IGGYHGVQVE RILELEPDLV VVWGSGNKVE DITRIKALGF RVFDSNPDTL DEVADELESL GELTGHQVLA AKVAADYRQQ LKQLRSENLA KSGVNVFYQL WSTPLMTVAK DSWIQQIISV CHGDNVFADA ANDYPQVSLE TVVLKQPEVI LQSQDEGNIL GVDWSAWPEI PAVKNKHIYQ LNADLLHRAA PRALLGVEAL CDALDKAR
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