| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3347 |
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| Symbol | |
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| ID | 5663735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4092267 |
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| End bp | 4092977 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238005 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_001503197 |
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| Protein GI | 157963163 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000384276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCTACC GAGTACTAGT TGTCGATGAT GAAGCTGTCA TTCGAGCTAG GTTAAAAGGT
TATTTTGAGA AAGAGGGTTA TGAAGTCCTC GAAGCTCAAG ATGGTGACCA GATGTGGCAA
GAATTCGATC GCCAGCATAT CGATTTGGTC ATGCTTGATA TTAATTTACC TGGTGTTGAC
GGGTTAAGCC TCGCCCGAGA ACTGCGCAGT AGAAGTCACG TTGGCATTAT TTTGGTCACT
GGCCGTGATG AAACCATAGA CAAGATTGTT GGCTTAGAGA TGGGAGCCGA CGATTATGTC
ACTAAACCTT TCGAGTTACG TGAGCTATTA GTTAGAGTTA AGAATCTACT CTGGCGCATG
TCGTTAGTGA AAAAGGCCGT TGCCGATAGT GTCGAGCAAG ACGATCCAAA TGACAATATC
ATCGCATTTA ACGACTATAT ATTAGAGCTC AATAGCCGCC AATTGACCCA CAACGGCGAG
TCAATCAAGC TCACTAAAGC CGAGTTTGAG TTGCTTACAG CCTTTTCTCT TCACCCACAA
CAGGTGTTAT CTCGCGAACG TTTAATGTTG CAAACTAGCC ACAGAGATCA GGACGTAAAC
GACAGAACAA TCGATGTGAT TATCCGTCGC CTGCGAAACA AGCTATCAAG CGATTTATTT
GTTACCGTTC ACGGTGAAGG CTACTTGTTT GCGGCTAAGG TGAAAGACTA G
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| Protein sequence | MGYRVLVVDD EAVIRARLKG YFEKEGYEVL EAQDGDQMWQ EFDRQHIDLV MLDINLPGVD
GLSLARELRS RSHVGIILVT GRDETIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRM
SLVKKAVADS VEQDDPNDNI IAFNDYILEL NSRQLTHNGE SIKLTKAEFE LLTAFSLHPQ
QVLSRERLML QTSHRDQDVN DRTIDVIIRR LRNKLSSDLF VTVHGEGYLF AAKVKD
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