| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3327 |
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| Symbol | |
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| ID | 5663715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4069772 |
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| End bp | 4071838 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237985 |
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| Product | TonB-dependent heme/hemoglobin receptor family protein |
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| Protein accession | YP_001503177 |
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| Protein GI | 157963143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01785] TonB-dependent heme/hemoglobin receptor family protein
[TIGR01786] TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0926253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGA AGCCTGTTGT AGTCGCTATG GCAATGGCTC TAAGCTCGGG CGCATTTGCT
GCGCAAACTC AGCAAGTCTC TGAGCAGCAA ATAACTGAGT TTGATGAAGT GCTTGTCACC
GCGACTCGTG TAAGCGAGAA AGCATCGGAA ACTAGCCGCA GCGTGGCAGT CGTTACTGAA
GAGCAATTGC AGGAGTCGCA ACCTTCATCG GTTGCCCAGG CATTGAAAAA TGAAGCTAAC
GTTAATGTGA GCAATGGTCC TCGTGCTTCA TCTCAAGGCG TTGAGATCCG TGGTCTTGGT
GGCCAGCGAG TGCTGCAAAC TATTGATGGT GCTCGTCAAA ACACAAATTC AGGCCATCGC
GGCACCTACT TTATGGATCC TGAGCTTTTA AGTTCGGTCG AAGTGGTTCG TGGCCCTGCT
AGTAGTTTAT GGGGCAGCGG GGCGATTGGT GGCGTCGTTG CGCAAAATAC CAAGTCGGCA
GCAGACTTTT TAGACGAAGA AGACAGCTTT GGTGGCTACC TTAAGCAAGG TTATGAATCT
AACGGCGACC GCATTAAAAC CAGTGGTGCG ATTTACGGCT TAACCCAAAC TGATGCAGCT
GGCAAGGTAG ATTGGTTACT CAATGGTAGC TACTACGACA GCAACAATAT CAAAATTGGT
AATGATAAAA CGCTAGAGAA CAGTGCGTCG CAAGGCACAA GTGGTCTAGC AAAATTTGGC
TGGGAGCCAA CGGATGAACA GCGCCTGCAA CTGTCTGCAC GTTTTTCTGA TACTGACGAG
TTAGTACCGA GTAACCCAGC GACTAACGTC GGCACCTCGG TACCTTTAGT TAAGCGTAAA
ACCCAAGATC AAAACGTGAC GTTAGATTAC AGCCTAAACC CGACAGATAA CGCCTTACTT
GACTTAAATG CCACCCTGTA TTGGAACGGT ACCGATTACG ATGAAGATCG CGTCACTAAA
AACCAATTTG ATAGCACTGA ATATGAAACT CTAGGTTTTA GTCTTAGTAA TAGCTCTACG
CTAGGTAATA CTGTACTGAC ATACGGTGTT GATGGTTATC AGGACTCAAT TAAAACAGTA
CGTGATGACA GCGGCCAATT TGGCCAACGT CCAGATGATA TAGACGGCGA CACCACAGTT
TGGGGTGCAT TTACTCGTGC CGATATTGAG TTAACAGAGA CTTGGTCTGT GGACGCTGCT
GTGCGTTACG ACGCTTTTGA AAACCAGAGT AACAACCTTA ATCAGTCATC GGATGATAGC
GCATTTTCCC CTTCAGTTGG CCTAGTGTGG AAGACCACTG ATTGGTTAAC TTTGAGCGCA
CGTTACGATC AAGCATTCCG CGCCCCAAGC ATGGAAGAGA TGTACTCAAC AGGTACCCAC
TACTGTATTC CAGCTATTCC AGGTTTCTTG CCGAACGGCC TATGTAACAC CTTTGAGATC
AACCCAGACC TTAAAGCTGA GCAAGCAGAA AACAAAGAAA TTAAAGCCGA TTTACGTTTT
GCCAATCTAG CGGGTAATGA CGAGCTTGCC ATTACGCTTA ACGTGTTTAG AAATGACGTA
GATGACTTTA TCGAGCAATC AGTTTCGAAT CCATTAATGG GCATCCCCGG CTTTGAGCAA
ACCACCTCTT GGGACAATGT TGATGAAGCT AAACTGACTG GTTTTGAGTT TTCAACTCGC
TACCGTTATG AGCAAACTCG CGTGAGCTTC AACTACGGTC AAACCGAAGG CAAAGACAAG
GCTACAGACG AATACTTATC AAACATTCCC GCTAAGAAGT TAGCGATTGA CCTTTCACAA
GGGATCATGG AAGGCGATAT GAAGGTTGGT ACTCGCTTTA CTTATGTTGC CGAGCAAGAT
CAGCTACCAG TAGATAACGT AAATCAGTAC GACTCTTACA AACTATGGGA TATGTATGTG
GCATGGGAGC CAGCCATGGG CACATTTGAA GGTCTACGAG TCGACTTCGC AGTAGAAAAC
ATTGGTGATG AGGAATATCG CCAAGCGTGG CAAACCTTGT ATGAACAAGG CAGGAATTTC
AAGTTGTCAG CGCGCTATAA CTTCTAA
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| Protein sequence | MTKKPVVVAM AMALSSGAFA AQTQQVSEQQ ITEFDEVLVT ATRVSEKASE TSRSVAVVTE
EQLQESQPSS VAQALKNEAN VNVSNGPRAS SQGVEIRGLG GQRVLQTIDG ARQNTNSGHR
GTYFMDPELL SSVEVVRGPA SSLWGSGAIG GVVAQNTKSA ADFLDEEDSF GGYLKQGYES
NGDRIKTSGA IYGLTQTDAA GKVDWLLNGS YYDSNNIKIG NDKTLENSAS QGTSGLAKFG
WEPTDEQRLQ LSARFSDTDE LVPSNPATNV GTSVPLVKRK TQDQNVTLDY SLNPTDNALL
DLNATLYWNG TDYDEDRVTK NQFDSTEYET LGFSLSNSST LGNTVLTYGV DGYQDSIKTV
RDDSGQFGQR PDDIDGDTTV WGAFTRADIE LTETWSVDAA VRYDAFENQS NNLNQSSDDS
AFSPSVGLVW KTTDWLTLSA RYDQAFRAPS MEEMYSTGTH YCIPAIPGFL PNGLCNTFEI
NPDLKAEQAE NKEIKADLRF ANLAGNDELA ITLNVFRNDV DDFIEQSVSN PLMGIPGFEQ
TTSWDNVDEA KLTGFEFSTR YRYEQTRVSF NYGQTEGKDK ATDEYLSNIP AKKLAIDLSQ
GIMEGDMKVG TRFTYVAEQD QLPVDNVNQY DSYKLWDMYV AWEPAMGTFE GLRVDFAVEN
IGDEEYRQAW QTLYEQGRNF KLSARYNF
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