| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3320 |
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| Symbol | |
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| ID | 5663708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4060373 |
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| End bp | 4061827 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237978 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_001503170 |
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| Protein GI | 157963136 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.296096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTGCCA TAAACCTTGA AAAGAAAACC AGTCACGATG ATTTTCTTCC CGAGAACCAA
CTCATTCTGA ACGCGGTCAG CGAAGGCATT TACGGTTTCG ATTTAGCGGG TAATGCGGTT
TTTATTAATC CCGCTGCCGA GCGAATGACA GGCTGGCAAT CCCATGAGTT ACTAGGCAAG
AATATCCATG ATTGTCATCA CCATAGCCAC AGCGATGGTA GCCATTACCA TAAAGATGAC
TGCCCGATTT ATAACACCTT AATCGACGGC ACTGCCCGTG AGATCTCTCA TGAAGTCTTC
TGGCGCAAAG ACGGCACCAG CTTTCCGGTG CATTACACCT CTACCCCAGT GTACAAAGAT
GGCGTATTAA TTGGCGTGGT CGCGATATTT CGTGACATCA GTATTCAGAA GCAAACTGAG
CATTCATTAC GTCAGGCGCT CGAGCAAGTA CAAGCCCTAT CGGAAAAGCT GTCGTTTGAA
AACCAATACC TACAACTAGA ACTGGCAGAT AGAACTGGGG ATGTTGAGAT CTCAGGTAGC
AGCCAGCCGA TGAATCAGCT AATTCAGCAA ATTAAACTCG TTTCCAATAC CGAGAGTACG
GTATTGATCA GTGGCGAAAA TGGCACAGGC AAAGAGTTAG TCGCCCGCAA CTTACATCGC
TTGAGTAACC GCGCAGATAA GCCATTAATC AGCGTCAACT GCGCCGCCTT TTCCAGCGCC
TTGTTAGAGA GTGAACTATT TGGCCATGAA AAAGGGGCAT ACACAGGTGC CACCAGCCGC
CGTAAAGGGC GATTTGAACT GGCTCACCAA GGCACGCTGT TTCTAGACGA AGTAGCCGAG
CTCAGCCTAG AAGCCCAGTC TAAACTACTG CGGGTGATCC AGGAGCAGGA ATTTGAGCGC
GTAGGCAGTA GCCAAACCAT CAAGGTAGAC ATTCGCCTCA TTACCGCAAC TCACCATGAT
CTGCTTAAGC GTGTAGAACA AGGCTTGTTC CGTATGGATC TCTATTATCG CCTCAATGTG
TTTCCCATCG TGGTACCGCC ATTGAGGCTA CGATTAAGCG ATATCCCTGA ATTAGTCAGC
CATCTCATTC AAGACTTAAA CCGCAAGCTA GGTAAGAAGG TCACCCAAGT TAGCCACAAA
GGCATGACCA AACTCATGCA ACACAGTTGG CCGGGAAACG TACGTGAGCT GCAAAATGTC
TTGGAGCGTG AGATGATTTT ATCCCAAGGG CCAGTACTGG AGTTCTCACA GCTACAGTTT
GCAGATCAAG CTGAAAATCC TCCCCTAGCG ACCAGCCAAA CCTTACAAGA GGTGGAACGC
CAACATATTT TGCATGTACT CAAGCAAACC CAATGGCGGA TATCAGGGGC AAGCGGCGCA
GCGGCATTGT TAGGCCTTCC ACCGAGCACC TTACGTTCAC GGATGAATAA ATTGGCCATT
TCTCGCCCCG TCTAA
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| Protein sequence | MSAINLEKKT SHDDFLPENQ LILNAVSEGI YGFDLAGNAV FINPAAERMT GWQSHELLGK
NIHDCHHHSH SDGSHYHKDD CPIYNTLIDG TAREISHEVF WRKDGTSFPV HYTSTPVYKD
GVLIGVVAIF RDISIQKQTE HSLRQALEQV QALSEKLSFE NQYLQLELAD RTGDVEISGS
SQPMNQLIQQ IKLVSNTEST VLISGENGTG KELVARNLHR LSNRADKPLI SVNCAAFSSA
LLESELFGHE KGAYTGATSR RKGRFELAHQ GTLFLDEVAE LSLEAQSKLL RVIQEQEFER
VGSSQTIKVD IRLITATHHD LLKRVEQGLF RMDLYYRLNV FPIVVPPLRL RLSDIPELVS
HLIQDLNRKL GKKVTQVSHK GMTKLMQHSW PGNVRELQNV LEREMILSQG PVLEFSQLQF
ADQAENPPLA TSQTLQEVER QHILHVLKQT QWRISGASGA AALLGLPPST LRSRMNKLAI
SRPV
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