Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3315 |
Symbol | |
ID | 5663703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4057017 |
End bp | 4057574 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237973 |
Product | pilin, putative |
Protein accession | YP_001503165 |
Protein GI | 157963131 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.540059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACTCTC CAGCCCAATC CTCTCAACGA CACTCAGGTT TCACGCTAAT TGAGCTGGTT GTTGTGATTA TCATTTTAGG CATTCTCGCC GTTGTTGCCG CACCTAAGTT TCTGAGCCTT TCTGAAGATG CACAGGTTTC GCATGTTAAA GCTACTGGTG GCGCCTTTAA ATCGGGGATC GATTTAGCAA GAGCCGTTTG GGCGGTGAAG GTGGGAGATG GTCCAGCTGA AAATCTTCCG GTATTTGGAG ACTCAGATGA CAATCACGTC GACTTCAATG CTAACGGCTG GCCTGCCCAG CATTACTATA CCGATGATGA AGAATCGCCT AAGCTGGATA ACGTTGAAGA CTGTATCTCG GTGTGGGAAG TACTTTTTCA AAACAAAGAA CCCACGGTTT CAAAATCGAA TTCCGCGGAT GAAACCGACT ATAAAGTCAG TTACGATAGC TCTGTACCAG CTGTTTGTAT GTTCAGCTAT ACAGACAACC CTAACCTATC AATTACTTAC AACTCGAATA ATGGTAGCGT TGTGGTGGAC TCAGATCCGA GCAGCTAG
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Protein sequence | MYSPAQSSQR HSGFTLIELV VVIIILGILA VVAAPKFLSL SEDAQVSHVK ATGGAFKSGI DLARAVWAVK VGDGPAENLP VFGDSDDNHV DFNANGWPAQ HYYTDDEESP KLDNVEDCIS VWEVLFQNKE PTVSKSNSAD ETDYKVSYDS SVPAVCMFSY TDNPNLSITY NSNNGSVVVD SDPSS
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