Gene Spea_3314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3314 
Symbol 
ID5663702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp4056093 
End bp4056761 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content50% 
IMG OID641237972 
Producturacil-DNA glycosylase 
Protein accessionYP_001503164 
Protein GI157963130 
COG category[L] Replication, recombination and repair 
COG ID[COG0692] Uracil DNA glycosylase 
TIGRFAM ID[TIGR00628] uracil-DNA glycosylase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.518113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCGC ACTCTAGCTG GTCATCGTTT ATAAACGAAC AGCAGCAACA AGACTATTTC 
CAATCCTTAC AGCTGTTTGT TGAAGCCGAA CGCGCAGCGG GCAAGGTTAT TTATCCGCCT 
GAGAGCGAAG TGCTGGCCGC ATTTGACTCG ACGCCATTGG ATAAGGTACG CGTGGTGCTA 
ATAGGGCAAG ACCCTTATCA TGGTCCCGGG CAGGCACATG GCTTGTGTTT CTCAGTTAAA 
CACGGAGTTA AGACGCCGCC GTCCTTGGTG AATATGTATA AAGAGCTGGC AACAGATATT 
GATGGTTTCA GTATTCCAGA GCATGGCAAC CTGAGTCACT GGGCCGAGCA GGGAATATTG 
ATGCTCAATA CCGTGTTAAC CGTCGAGCAG GGCAAGGCGC ACTCCCACGC TAAATCGGGT 
TGGGAAACTT TTACTGCCAA TGCGCTTGAG TTACTGAATC AACAAGCTCA ACCGATAATC 
TTTGTGCTTT GGGGCGCTCA CGCCATTAAA AAGGGTAAAG TGATTAACGC ACCGCAGCAT 
CAGGTTATCT CGGGGCCGCA CCCATCGCCG TTATCGGCCT ATCGTGGATT CTTTGGTTGT 
CAGCATTTCT CAAAAATTAA TGCGATCTTG CAAGCTAGAG GCGAAGTGCC GATAGACTGG 
CAGGTATAA
 
Protein sequence
MTAHSSWSSF INEQQQQDYF QSLQLFVEAE RAAGKVIYPP ESEVLAAFDS TPLDKVRVVL 
IGQDPYHGPG QAHGLCFSVK HGVKTPPSLV NMYKELATDI DGFSIPEHGN LSHWAEQGIL 
MLNTVLTVEQ GKAHSHAKSG WETFTANALE LLNQQAQPII FVLWGAHAIK KGKVINAPQH 
QVISGPHPSP LSAYRGFFGC QHFSKINAIL QARGEVPIDW QV