Gene Spea_3255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3255 
Symbol 
ID5663644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3993335 
End bp3994522 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content45% 
IMG OID641237914 
Productankyrin 
Protein accessionYP_001503106 
Protein GI157963072 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAGCA GTAATATTTT CGACAGATTA GAGCTAGACG ATGTGCTCCG CGGGCATCTT 
GATGGATTAG ATAGTTATGA TGAGCCTTAC TTTATCTGTA TGCAACTGAG TACGACTGCT
GATGCAGCGA TAAAGCTGCT GATCCCTGAG CTTGATCATC TTGATGACGA TATCTTTGCT
TTTAGACTAG AAAAGCAGTT GCTGTTACTC AGCCTTGAGT GCGAAGTTGA TGAGGTTAAG
TCGTTATCAC AGATGTTGCT GAAAGCTTTT GCTACTAATA ACGTCACTGC GCAAATCGCT
ATTTTTCATC ATAACTGCCT AGGCACGCCG ATTGAGACCT TGAAGTGGTC TACACAACTG
TTAGAAACTT TAATTGAGAA GTCGCCTAAT GAGCCTATCG TTGAGTTTAA CGACTTTTGT
GATCGTGGCA ACTGGCCAGG ATTGAGTGCC TATATAGAAG GGCGTGAGCA AGGTAACGGC
GCTGACTACG GCTATGACTA TGACGAGAAA GACTATGATG AAGACGACGA TGATGATGAC
GATGATGAAA ACGATGATCG ATTTGATGCC GATGGCTTTG ATGAGGATGG CTTAAACGCC
AGTGGTTTTA CCGCACTTAT CCAGGCTATT TTAGATAAAG ATGCCGCAGC GGTAACCAAT
ATGATAGCTA ATGGCGCTGA TATTAATAAA GGCGATTGGT ACAAGAATAC ACCGCTTAAT
CATGCGGTCC AAAAAAGCAC TCTTGAGATT GTTAGCTTGC TACTCGAGGC GGGCGCTAAC
CCTAACCAAG CCGGGAGTGA CGGAACTAAA GCGCTCTATA TTGCCAGCTT AAACGGCATG
TTGCCGAAAA TGCAGTTGCT GTTAACTAAG GGCGCAGACG TAAACGACAA AGATGATGAA
GGTGAGAGCG CACTCATAAC GGCCGCCGGA AATAGCACTG CCGAGGTGGT TTCGTTATTA
CTGCAAGCAG GCGCAAACGT TAATGCGATG ACTGATGATG GTAATACAGC ACTAATTAAG
GCTGTTATTG GTAACTATAA TGAACGCGCA GCGATTGTAG AATTACTGCT GGCTAATGGT
GCAGCAGAGA CGATTCATCA TCAGAATATT CATGACTCAA GCGCCATGGA CTTAGCGCTC
GACCGTGAGC ATCAAGACAT TATCGAGCTG CTTAAACAAG CGATGTAA
 
Protein sequence
MLSSNIFDRL ELDDVLRGHL DGLDSYDEPY FICMQLSTTA DAAIKLLIPE LDHLDDDIFA 
FRLEKQLLLL SLECEVDEVK SLSQMLLKAF ATNNVTAQIA IFHHNCLGTP IETLKWSTQL
LETLIEKSPN EPIVEFNDFC DRGNWPGLSA YIEGREQGNG ADYGYDYDEK DYDEDDDDDD
DDENDDRFDA DGFDEDGLNA SGFTALIQAI LDKDAAAVTN MIANGADINK GDWYKNTPLN
HAVQKSTLEI VSLLLEAGAN PNQAGSDGTK ALYIASLNGM LPKMQLLLTK GADVNDKDDE
GESALITAAG NSTAEVVSLL LQAGANVNAM TDDGNTALIK AVIGNYNERA AIVELLLANG
AAETIHHQNI HDSSAMDLAL DREHQDIIEL LKQAM