Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3235 |
Symbol | |
ID | 5663624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3965819 |
End bp | 3967702 |
Gene Length | 1884 bp |
Protein Length | 627 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237894 |
Product | curlin-associated protein |
Protein accession | YP_001503086 |
Protein GI | 157963052 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACACA CTAAAATTGC ACTGCTGGTC TCATCAGCGA TATTTGCATC GACTAGCGCT TACGCAGCAG AAAGCACTAA TAATACTGCA ACAGTAAATC AAGCTGGTGA TACCAACCAA GCATACGTAT CTCAATCTAT CGAAAGCTCA AACAATACTG CAACAGTCGA TCAAAACGGT AGCACGAACG AAGCGTCTAT CTCACAAACT GAAACCTCTT TCGCGACTGC TGATATTGAT CAGTTAGGTA ATGGTAACCA AGCCAATATC CAGCAGCACG ATGAGATTAG TACTTCGACG GCTACAGTTG ACACTACTGG TGATGGTAAC TACGCAAGCA TCAGGCTGCA ACGCGGCACA CAAGAGCAAG CGACTGCGAT AATCACCCAA AATGGTGATA CTAACGATGC GAGTATTTTC CAAGATAGTG CAGATGGCTC ACTATCAAGC ATTACTCAAA ACGGTTCTGG TGATACGGCA TTTATCAATA ACATGGCAAC AGATCACGCA AGTGCAACCA TCACCCAAAA TGTAGGTGGC GGTAATAATG CAACGATTCA GCAAGGTGAT GCTGATTATG CAACTGCAGA GCTAAACCAA ACAGGCAGTG CGAACATTGG TGTTATCGAC CAGTTCACTA ATGCAGATGA TCATTATGAT AAATCAGACT CGACAGTGGC GACCCTTAAC CAAAATGGTG CAGGCAATAA TGGTTATATT AGCCAAACAG CGATGCAAAC CACAGCGAAT GTTAGTCAGT TAGGCGATGC AAACATTGCC AGTGTTTCTC AAACTGGTGA ACTTGCTGTA GCAAACCTTG AGCAAGTTGG TAATAACAAC CAAGGCTATA TTAACCAGCA AGCTAATGAC TCAGTTACCG CAACACAAAC AGGCAATGGT AACGGCCTTT TTGCTAATCA AGCGGGTTCA GAGCATTTAG GTAATACGTT AAGCGCTAGC CAAACAGGTA ACCTTAACAA CATCTATGTA AATCAAACTG CGGATGCGGG CACTTCACAG TCTGCTATGG TTGAGCAAAT TGGTAATCAA AACCAAGCAT CAGTTAATCA GTCAGGTGCA GGCCAAGTTG CTAATATCAC TCAAGCAAGT GACTTAAGTG TTGTTTCGTT AAGCCAGCAA GACCAAGGTA ACAGCGCCAC AGTTAATCAG ACTGGTACAG CTCAAACGGC AACCATTACT CAATTTGATG AGTCAAACGT TGCCAACGTG ACACAGGGTG GTTCAAACAA CCAACTAACA CTGACTCAAA GTGGTAGCAC TGCGGGTAAC GGTAATGAAG CAATTGTAAG CCAAGCGGGT AACGGTGATG CAGCCGTTAT TGTTCAAGTA GGCGAAAACA ATACTGCAGT TGTTGAGCAA GCAGATGACA GTTATGGCAA CAGCATTAGT ATTAATCAAA ATGGTGAGGG TAACTATGCT GGTGCTGGCA CGCGTTATGG TAGCGGTAGC CAAATCATCA TTGACCAGCA AGGTTCTGAT AACGTCATTA CGGGGGGGGG GAATACACCT AGTTATTACG GTGACACCGT TGGTGCAGGT ACTTGGGGAG CGGATAATAT CCTTATGGTT TCACAAGATG GTACCAGTAA CCGTGTTTAT GCTGATGCAT CGCATGACCA GTCGGTTGTT GATATTTCAC AAACTGGTGA GTTTAACGAA GCATCAGTTG AGTCTTGGTG GGGCGCTGAA AATGATATTA CTGTAGCTCA AACAGGTGAC AATCACACTA CAGACGTATT TGTTTATGGT GGCGCAGGTA ACCATGTTTC AATTATGCAA TACAATGCAA GTAACACTGC TGTTGTGACT TCTACGGGAA GCCATAATAG CGCGACAATC ATTCAGGGTA GCATGCCTCA GTAA
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Protein sequence | MKHTKIALLV SSAIFASTSA YAAESTNNTA TVNQAGDTNQ AYVSQSIESS NNTATVDQNG STNEASISQT ETSFATADID QLGNGNQANI QQHDEISTST ATVDTTGDGN YASIRLQRGT QEQATAIITQ NGDTNDASIF QDSADGSLSS ITQNGSGDTA FINNMATDHA SATITQNVGG GNNATIQQGD ADYATAELNQ TGSANIGVID QFTNADDHYD KSDSTVATLN QNGAGNNGYI SQTAMQTTAN VSQLGDANIA SVSQTGELAV ANLEQVGNNN QGYINQQAND SVTATQTGNG NGLFANQAGS EHLGNTLSAS QTGNLNNIYV NQTADAGTSQ SAMVEQIGNQ NQASVNQSGA GQVANITQAS DLSVVSLSQQ DQGNSATVNQ TGTAQTATIT QFDESNVANV TQGGSNNQLT LTQSGSTAGN GNEAIVSQAG NGDAAVIVQV GENNTAVVEQ ADDSYGNSIS INQNGEGNYA GAGTRYGSGS QIIIDQQGSD NVITGGGNTP SYYGDTVGAG TWGADNILMV SQDGTSNRVY ADASHDQSVV DISQTGEFNE ASVESWWGAE NDITVAQTGD NHTTDVFVYG GAGNHVSIMQ YNASNTAVVT STGSHNSATI IQGSMPQ
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