| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3224 |
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| Symbol | |
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| ID | 5663613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3952171 |
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| End bp | 3953280 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237883 |
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| Product | putative outer membrane adhesin like proteiin |
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| Protein accession | YP_001503075 |
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| Protein GI | 157963041 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01965] VCBS repeat
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTAG TCAATAATCG TTTATCTATT CAGTACGATG AGCAGTTTTG GTTAATCGAC
GTTACACATC CTAGCTCTCC AGAGGTGATT GGCAATAAAG AAGTACCAGC ATTAAGCCAC
TCTAAAGATG TAAAAGTGTT AGGCGATACC TTAATCGCTG CGCGAGATGG TCAGCTTAAG
AAGTATCAGA TAAATATTGC ACCAGTCATT ACGGCTTCTC TCTTAACAGT CAATGAAGAT
GAAACGCTAA TACAGGAGCT CCCAGTAAGT ACTTGGCACG CAGGCGTATT AACTTTTGAA
ATATTGACGC AGGCTTCGAA GGGGACTGTT ACTGTTGACC ACGAAGGCGT TGTAAATTTC
TCCCCTAACA AAGATGAGTT CGGTGAAGAT CAATTTACTG TTAGAGTGGC TGACAATCAT
GGAAGGAGCT CTGAAAAAGA GATTCGGATT GATATCCTTC CAATTAACGA CGCACCTAGA
GTATTAGATC AGACATTTGT TACGAATGAG GATGTTGAAC TCCGTAGCAG TTTAATAGTT
GCAGAAGTTG ATAGCGATGA ACTCCAATTC GTGTTGGTTA CAGATACGCT AAACGGGGTG
GTCACGCTTA GTGAGTCAGG TGAATATTCT TATCAAGCGA CAGCTAATTT TAATGGTACA
GATAGTTTTA CTTTTAGTGT GACTGATGGC GTTAATGCTG CCGTTGAAGC GAGTGTTACC
ATAAACATTT TAGCGGTTAA TGATGCGCCT GTTGCAAGTC ATCAGTCGTT AAACATCGGA
TACAATCGTG AGGTCGCGAG TCGATTATCA GCTTTCGATG TTGATGAAGA TGAATTGATG
TTTGAAGTCG TTACCAATGT TAGTCATGGG GAATTAGCCT TAAATGATGA TGGTAGCTTT
ATCTATAACC CAAAAACTGA TTTTAGCGGT AATGACAGCT TTACCTATCG GGTAACTGAT
ACCGCAGGAA GCACAAGTGA AGCCGTTGTT AGTATAACAG TTAGTGCAAA ACCGAAAGAG
TCGACCTCAG ATTCATCGGG GGGCTCTCTT GGGTACTTGT GCTTACTCTA TTTGATGCTT
ACGGTTGGAT ATCGCCAAAG ATTTCGATAG
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| Protein sequence | MDLVNNRLSI QYDEQFWLID VTHPSSPEVI GNKEVPALSH SKDVKVLGDT LIAARDGQLK
KYQINIAPVI TASLLTVNED ETLIQELPVS TWHAGVLTFE ILTQASKGTV TVDHEGVVNF
SPNKDEFGED QFTVRVADNH GRSSEKEIRI DILPINDAPR VLDQTFVTNE DVELRSSLIV
AEVDSDELQF VLVTDTLNGV VTLSESGEYS YQATANFNGT DSFTFSVTDG VNAAVEASVT
INILAVNDAP VASHQSLNIG YNREVASRLS AFDVDEDELM FEVVTNVSHG ELALNDDGSF
IYNPKTDFSG NDSFTYRVTD TAGSTSEAVV SITVSAKPKE STSDSSGGSL GYLCLLYLML
TVGYRQRFR
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