Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3212 |
Symbol | |
ID | 5663601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3937337 |
End bp | 3938230 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641237871 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001503063 |
Protein GI | 157963029 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC TGTTTGATGG TATCGTGATA TTTGTGCAAG TGGTAAAGAG TGCAGGTTTC TCCGCCGCGG CAGAAGTCTT GGGACACTCC ACCTCCTATG TCAGCAAGGA GGTCAATAAA CTGGAGTCTA GACTCGGAGT GCGACTGCTC AATAGAACCA CGCGCTCGAT AGGCTTAACC CCTGAGGGAG ATGCCTATTA TCAGCAGTGC CTACAATTGA TTAGCGACGC CGAGCAGGCG ATAGGCTTAA TCACTCAACA TGATGTGAGC CCTCGTGGAG TACTAAAACT CAGTTGTCCC GTCGGTTTCG CCCAGCAACA CCTCAAGCCC ATTATCTCCG AATACCTAAA GCGTTACCCC AATGTGAGTT TAGATTTAGA TCTAAGTGAT AAGCGCACCG ATGTGATTGC CGATGGTTAT GATTTGGCCA TTAGAGCATC GGCGCAGCTG GAAGAATCCA GCCTCATCTG CCGTAAGCTC TATAGCTGTA AAGCTTATAC TGTGGCGTCG AAAGAATACA TTTCACGCCA TGGTAAACCT CACCACCCCA GAGAGCTCGA GACACATAAC GGGATCTGTT ACTCCAACCA TAAACAGCCA AGCAGATGGG ATTACATTGA CCATGACGGC AAACACTTTT CGGTGGATAT TAGGCCAAAG ATCCTCTGTA ACAACGGCAA CATGCAGCTA AATCTAGCGC TGGCGGGACA TGGCATCACT CGCTTACCTA ACTTCTATAT GCAAGGTGAA CTCGAAAATG ATCAGTTAGA GATCCTGTTT GACAAGTTTC CCAGCGCCAA TATTGATGTG TTCGTGGTTT ACCCAAGCCG CAAACACCTA TCGCCCAAAG TCAGAGCCTT TATCGATCTG GCTGCCGAAC GGTTAGCTGG ATAG
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Protein sequence | MNKLFDGIVI FVQVVKSAGF SAAAEVLGHS TSYVSKEVNK LESRLGVRLL NRTTRSIGLT PEGDAYYQQC LQLISDAEQA IGLITQHDVS PRGVLKLSCP VGFAQQHLKP IISEYLKRYP NVSLDLDLSD KRTDVIADGY DLAIRASAQL EESSLICRKL YSCKAYTVAS KEYISRHGKP HHPRELETHN GICYSNHKQP SRWDYIDHDG KHFSVDIRPK ILCNNGNMQL NLALAGHGIT RLPNFYMQGE LENDQLEILF DKFPSANIDV FVVYPSRKHL SPKVRAFIDL AAERLAG
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