Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3203 |
Symbol | |
ID | 5663592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3927359 |
End bp | 3928261 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641237862 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001503054 |
Protein GI | 157963020 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0729456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGC TTAGACATTT ACGTACGCTA GTTGCCCTAA AGGAAAGCGG CAGCCTTGCT GGGGCAGCAA AAAAACGCTT CGTCACTCAG TCAGCACTCT CGCATCAGAT CAAGGAATTA GAGACTCGTA TTAACTCTGC TATTTTTGTA CGCAAGAGTA AGCCGCTCTC TTTCACACAA GAAGGCGCGA GATTACTCAA CCTTGCTGAA GATATTCTAC CTAAGGTGAT CGAAACGGAG TTTGATCTCA AAAAGGGCCT AGAAGATGGA GATAATCACT TAGGTGTTGG CATCGAATGT CACAGCTGTT TCCGCTGGTT AATGCCTGTG ATGGAAGAGT TCAGAAAGCA ATATCCGCAA GCCGAACTCG ATTTATCCAG CCGTCATCTG TTCGACTCGT TGAACGCACT AGAGCAAGGT GATCTGGATG TTGTACTGAG CTCAGATCCT GTGCCTGGTC AGTCAATTGC TTATCAGCAT CTGTTTGATT TCGAAGTTAG ATTAGTGGTG GCCAGTGATC ACCCTCTAGC TCAGCAAGAA TATGTCACAC CGAAACAGTT AGAGAATTTA CCGATTTTAA GCTACCCGGT AGCACTCGAA CGCTTAGATA TATACCGCCA CTTTTTAGAG CCGGCAGGCA TTCAACCCGG TCCACAAGTA AAGTGTGATT TAACCATGAT GCTGTTACAG CGAATTGCCT GTAAAGATGG TGTTGCCGCT TTGCCAAGCT GGTCGATAAG TGAGGCGCAC GGCCTAAGTC TTACCAGTGT AAAACTGGGC CCTGAAGGGC TAAAGCGTCC ACTTTTTGGG GCGTATCGTC GCAACGGCGC TAATGCTCGT TTAGCGCAAC ATTGGTTAGA GCTAGTGGCT AAAGAAGGTT TGGCAAAACA GAAGCTCAAT TAA
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Protein sequence | MIELRHLRTL VALKESGSLA GAAKKRFVTQ SALSHQIKEL ETRINSAIFV RKSKPLSFTQ EGARLLNLAE DILPKVIETE FDLKKGLEDG DNHLGVGIEC HSCFRWLMPV MEEFRKQYPQ AELDLSSRHL FDSLNALEQG DLDVVLSSDP VPGQSIAYQH LFDFEVRLVV ASDHPLAQQE YVTPKQLENL PILSYPVALE RLDIYRHFLE PAGIQPGPQV KCDLTMMLLQ RIACKDGVAA LPSWSISEAH GLSLTSVKLG PEGLKRPLFG AYRRNGANAR LAQHWLELVA KEGLAKQKLN
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