| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3197 |
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| Symbol | |
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| ID | 5663586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3919563 |
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| End bp | 3920456 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237856 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503048 |
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| Protein GI | 157963014 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGTG CGATGCGGAT CTTCATCAAA GTGGTTGAAC TAGGAAGCTT CTCCAAAGCT
GCCGAAGTAC TCAATATGGC GCCATCAAGT GTCGCCCGCA ATATCGACAG TCTTGAGCAA
GACTTTAATG CAGTCTTGCT CAAGCGCAGC ACTCGTCAGC TATTACTCAC TGAAGCCGGT
GAACTCTTCT TAGAAGGTGC ACGCAAGCTG GTTAATGATG AAGAGACCCT GAAAACGTCG
CTTTCAAAAC GAGATAGCCA ACCTGAAGGA ATATTAAGGA TATCGGTCTT TGAAGGATTT
GGGCGGGTAA AAATCTGCCC TATTCTGCCC GATTTCTTAG CTCAATACCC TAAAGTAAAG
ATTGAAATAG ACTTAGATAA TCAACTGGTA GATTTACACT CAGAAAATGT GGACATTGCA
ATTCGCATTG GCAATGCACA AGATTCGAGT CTAAACGCCA GAATGCTGAT GGCAAACCAA
ACTTCGCTCT GTGCTAGCGC TAAATACCTG GCTCAATTTG GCACTCCTAA GAAGCCTGAA
GAGTTGCAGC ATCATAACTG TTTACTCCTC GACCGGGACA GGCAGCGCAC CTACTGGCAT
TTCAAAAAGG GCAATCAATA TAAGAAAGTC CCAGTGCAAG GCAACTTAAC CTCAAGAGGC
GGCACGCCCA TTCTAGAGGC GGCGATACAT CACGGCGGCA TAGTGCAACT GTCGAGTTGG
ATGATGGAAG ACTTAATCCA AGATGGCAGT TTAGTGCGCT GCCTACCCGA CTGGACACCC
TCACTGTCAG AGCAATCCAG TGGCGATATC TATGCGCTCT ACCGCGGCGG TAAGCACATG
CGGCCAGTGA TCCGCGCCTT TATCGATTAC TTAGTAAAGG CGCTAAAGCG ATAA
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| Protein sequence | MLSAMRIFIK VVELGSFSKA AEVLNMAPSS VARNIDSLEQ DFNAVLLKRS TRQLLLTEAG
ELFLEGARKL VNDEETLKTS LSKRDSQPEG ILRISVFEGF GRVKICPILP DFLAQYPKVK
IEIDLDNQLV DLHSENVDIA IRIGNAQDSS LNARMLMANQ TSLCASAKYL AQFGTPKKPE
ELQHHNCLLL DRDRQRTYWH FKKGNQYKKV PVQGNLTSRG GTPILEAAIH HGGIVQLSSW
MMEDLIQDGS LVRCLPDWTP SLSEQSSGDI YALYRGGKHM RPVIRAFIDY LVKALKR
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