| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3186 |
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| Symbol | |
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| ID | 5663575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3905579 |
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| End bp | 3907267 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641237845 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_001503037 |
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| Protein GI | 157963003 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGATA ACAAACGCCC GCTCTATCTT CCTTTTGCCG GTCCAGCCAT TCTTGAAGCA
CCTTTGATCA ACAAAGGTAG CGCTTTCACC GACGAAGAAC GGATATTTTT TAATCTCGAA
GGCCTACTGC CCCACGTCAT CGAGACCATC GAAGAGCAAG CCTCTCGCGC TTATGATCAA
TACAAGAACT TCAGCAACGA TCTCGACAAA CATATCTACC TAAGAAACAT TCAAGACACC
AACGAGACTC TCTATTATCG CCTGGTGCAA AACCACATTA CCGAGATGAT GCCTATCATC
TACACCCCTA CAGTGGGGAT GGCCTGTGAG CGTTTCTCTA AAGATTACCG TCGTAACCGT
GGCCTGTTTA TCTCTTACGC CAATAAAGAC CGTATCGACG ATATTCTTAA TAACTCAACC
CGCCAAAAAG TAAAAATCAT CGTAGTGACC GACGGTGAGC GCATCTTAGG TCTAGGTGAT
CAAGGCATTG GTGGTATGGG GATCCCGATT GGTAAGTTAT CTCTATACAC CAGCTGTGGC
GGTATTAGCC CGGCTTACAC CTTGCCGATT ACACTCGATG TAGGAACCGA TAACCCACAC
CTACTCGAAG ACCCTATGTA CATGGGGATG CGTAGCCCAC GTATTGGCGG CGAAGAATAC
ACAGAATTTG TAGAAGCCTT TATGCAAGCG GTTCACCGCC GCTGGCCCGA CGCACTGATC
CAGTTCGAAG ACTTTGCTCA GAAGAACGCC ATGCCACTGC TTGAGCGTTA TAAAGATCAA
TACTGCTGCT TTAATGATGA CATTCAAGGC ACTGCCGCAG TAACTGTTGG CTCACTGTTA
GCAGCCTGTA AGGCGGCAAA AACACAGCTT AGCGAACAGC GCATCACCTT CTTAGGTGCA
GGCTCAGCCG GTTGTGGTAT TGCCGAGGCT ATCGTGGCGC AGATGGTGTC TGAAGGGATT
AGTGAAGCAC AGGCACGCAA GCAAGTGTTT ATGGTTGATC GCTGGGGCAT GTTGCAATCA
AATATGCCTA ACTTGCTACC GTTCCAGCAA AAGTTAGCGC AAAATTGTGA TGACATTACC
AGCTGGGATA ATTTCAGCGA CAACATCTCA CTGCTGGATG TGGTAAACAA TGCCAAGCCA
ACGGTATTGA TTGGCGTTTC AGGCGCGCCG GGTCTGTTCA CCGAAGAGAT CATCAAGGCG
ATGCACAGCC ATTGTAAGCG CCCAATCGTG TTCCCGTTGT CGAACCCAAC TAGCCGCGTT
GAAGCCACGC CGAAAGATAT CCTACACTGG ACCCAAGGCC AGGCGCTTGT AGCAACAGGT
AGCCCGTTTG AGCCAGTAGT GGTTGACGAT GTGACCTATG AAATTGCCCA GTGTAATAAC
AGTTATATCT TCCCAGGTAT TGGCCTTGGC GTATTAGCCT CTGGGGCAAA ACGTGTCAGC
GACGCCATGT TGATGGCATC GAGCCGCGCG TTAGCCGAGT GTTCACCACT GGCGATTGAC
GGTGAAGGCT CACTGCTGCC AAAGCTTGAA GATATTCATA AGGTGAGTAA GCATATTGCG
TTTGCCGTTG CCAGAACTGC AATTGAAGAA GGCCATGCGT TGCCAACAAC CAATGAGTTG
CTGACCTATG CGATTGAGGA TAACTTCTGG ACCGCAGAGT ATCGTAGTTA TAAACGAACT
GCGTTCTAG
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| Protein sequence | MDDNKRPLYL PFAGPAILEA PLINKGSAFT DEERIFFNLE GLLPHVIETI EEQASRAYDQ
YKNFSNDLDK HIYLRNIQDT NETLYYRLVQ NHITEMMPII YTPTVGMACE RFSKDYRRNR
GLFISYANKD RIDDILNNST RQKVKIIVVT DGERILGLGD QGIGGMGIPI GKLSLYTSCG
GISPAYTLPI TLDVGTDNPH LLEDPMYMGM RSPRIGGEEY TEFVEAFMQA VHRRWPDALI
QFEDFAQKNA MPLLERYKDQ YCCFNDDIQG TAAVTVGSLL AACKAAKTQL SEQRITFLGA
GSAGCGIAEA IVAQMVSEGI SEAQARKQVF MVDRWGMLQS NMPNLLPFQQ KLAQNCDDIT
SWDNFSDNIS LLDVVNNAKP TVLIGVSGAP GLFTEEIIKA MHSHCKRPIV FPLSNPTSRV
EATPKDILHW TQGQALVATG SPFEPVVVDD VTYEIAQCNN SYIFPGIGLG VLASGAKRVS
DAMLMASSRA LAECSPLAID GEGSLLPKLE DIHKVSKHIA FAVARTAIEE GHALPTTNEL
LTYAIEDNFW TAEYRSYKRT AF
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