Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3170 |
Symbol | |
ID | 5663559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3884520 |
End bp | 3885467 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641237829 |
Product | ornithine cyclodeaminase |
Protein accession | YP_001503021 |
Protein GI | 157962987 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTCA TTAATGCAGA ATCAGTTCAT CAGTCACTTA ATTTCCCCGA TCTAATCAAT GCCCTCGATG AGACATTTTC TCGCCCAGCA GGCATGCCCC AACGCCAAGT GTTCGGCCTA GATGAGTCTG GTGAGCATAA TGATGCTTTT GCCGTTTTAC CTTCATGGAA TGAAAAAGCG ATAGCCGTTA AAGCCTTTAC TTACTTCCCC GGCAACCCGA AAAAAGATCC TGCACTTGCT AGCTTATATT CAAAAATATT AGTCTTTAGC CGTGAAACCG GTGAGCCACA AGCCCTGGTC GATGGCACCA GTGTCACCTT CTGGCGTACA GCCGCTATCT CTGCACTAGG CAGTCGTTAT CTATCCCGTG AAGACTCAAG TAAATTGCTG GTTTGCGGCA CGGGTAACTT AGCTTCCTTT ATGGCGCTCG CTCACGCCAG CGTGCGCCCT ATTACCCAAA TCACAATTTG GGGACGCAGC GAAGAAAAGG CTCGTGCCAC TATTGAGCTT ATCCGTAATA AGCGCCCAGA TATTGAAGTA TTGCTATGCA CAGATCTTGA ACAAAGCGTG CGTGAAGCCG ATATCATTAG CTGCGCAACA GGAAGCCCGA CTCCGCTGTT TGATGGTGAT TGGGTACAAC CGGGCACCCA TACCGACTTT GTGGGTAACC ATAACCATGA CAGACGTGAG TTCGACACCA AGTTGATCCG CAAGTCTTCG GTATTTGTCG ATTCAAAAAT CAACGTGTTT GCGGAAGCGG GCGAACTGCT CCTGCCTATT GAAGAGGGGG ACTTCTCTCT CGATCAAGTT AAGGGGGAGT TGAGCCAGCT TTGTACGGCA CAAATTAAAG GTCGTACTAG CAATGATGAA ATCACCATCT TCAAGACGGT CGGTACGGCA CTTGCCGATC TTGTCGGTGC GCAACTGGTG TTTTCAAAGC TAAGCTAG
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Protein sequence | MLVINAESVH QSLNFPDLIN ALDETFSRPA GMPQRQVFGL DESGEHNDAF AVLPSWNEKA IAVKAFTYFP GNPKKDPALA SLYSKILVFS RETGEPQALV DGTSVTFWRT AAISALGSRY LSREDSSKLL VCGTGNLASF MALAHASVRP ITQITIWGRS EEKARATIEL IRNKRPDIEV LLCTDLEQSV READIISCAT GSPTPLFDGD WVQPGTHTDF VGNHNHDRRE FDTKLIRKSS VFVDSKINVF AEAGELLLPI EEGDFSLDQV KGELSQLCTA QIKGRTSNDE ITIFKTVGTA LADLVGAQLV FSKLS
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