Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3161 |
Symbol | |
ID | 5663550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3865578 |
End bp | 3866594 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237816 |
Product | transposase IS116/IS110/IS902 family protein |
Protein accession | YP_001503012 |
Protein GI | 157962978 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3547] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTA CTACAATTGG TCTTGATATC GCAAAGTCCG TTTTTCATTT TGTTGGCGTT AATAAAGCCG GAAAGCTTGT CAAAAAGAAG ATAATTAAGC GCAAAGAGTT AGTGCTTTTT CTTGCTCAAA TAGAACCTTG CCTTGTTGTG ATGGAAGCCT GTGGCGGTGC AAACTATTGG GCTAGGGAGT TCGAGAAAGT TGGCCATCAA GTTAAGTTAA TAGCACCCCA GTATGTCGTT CCCTACAGAC AAGGAAATAA GAATGACTAT AACGATGCAC TTGCGATAGC TGAAGCAGCA CAACGCCCCA ACATGCGCTT TGTAGAGCCT AAGCCAGTAG AGCAGCAAGA TATTCAGATG CTGCATCGAA TGAGAGAAAG ACTAAACAAA CAATCTACTG CACTGATAAA TCAAGTGAGA GGTATGCTCG CTGAGTACGG CATTGTCATC ACAAAAGGAA AAGCGTCTTT TAGGACAAAG CTACCAGATA TTCTAGAAAA TGCCGATAAC GAATTAACAG TCAAAGGCCG AAGTGTTTTT TATCAACTAT ATGAAGAGTT TAATGACATT GAGAAGCGAC TTAAAAACTG TGATGCCCAA GTTCAACAAG AGGTGAAAAG TAACCAAGTA TGCCAGCGCT TAGAAAGCGT ACCAGGCATT GGCCCTGTGA CTGCCACAGC ATTTTATGCA GCTGTTGGGC AAGGTAAAGA TTTTACCAAT GGGAGACATT TTTCAGCATG GTGCGGTCTA GTACCCAAAC AGCATAGTAG TGGCGGGAAA AATAATTTGC TTGGTATTAG TAAGCGAGGA AACGCTTATT TGAGAACGCT ATTTATCCAC GGGGCAAGAA CTGTCTTACA GCATAGTTCT AATAAAACTG ACAGATTTAG TTGCTGGGCT AGCGCACTTG CAGAAAGGCG TGGCTTTAAC AGAGCTTGTG TTGCCGTAGC TAATAAGCTT GCACGAATAG CGTGGGTTAT AGCAGCAAGA GAAGATGAAT ACCGTATCAC AGTATAA
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Protein sequence | MNITTIGLDI AKSVFHFVGV NKAGKLVKKK IIKRKELVLF LAQIEPCLVV MEACGGANYW AREFEKVGHQ VKLIAPQYVV PYRQGNKNDY NDALAIAEAA QRPNMRFVEP KPVEQQDIQM LHRMRERLNK QSTALINQVR GMLAEYGIVI TKGKASFRTK LPDILENADN ELTVKGRSVF YQLYEEFNDI EKRLKNCDAQ VQQEVKSNQV CQRLESVPGI GPVTATAFYA AVGQGKDFTN GRHFSAWCGL VPKQHSSGGK NNLLGISKRG NAYLRTLFIH GARTVLQHSS NKTDRFSCWA SALAERRGFN RACVAVANKL ARIAWVIAAR EDEYRITV
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