Gene Spea_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3159 
Symbol 
ID5664816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3863366 
End bp3864334 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content43% 
IMG OID641237814 
Producthydrolase (secreted protein) 
Protein accessionYP_001503010 
Protein GI157962976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.090104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAATA CATTACAGAG CTTATCAATA TTAACGTTTG CAGTATCTTT GGGTTTTTCT 
AACTTTTCTC AAGCAAATCA GTCTCAAGCT AATCAGTCAC AAGAAGGCAA TGAACAGGTT
TTCTTCGATG AATTTAGTTA TACCGACGTC AAGAGCTTTA ATAGTAACGG TTGGAAAGCC
AGAACTGAAA CCGGTCATCC TGGTATTGCT GGGGCAACAT GGTCTGCTGA AGGTTTGAGT
TTTCATCCTG AGCTTAAGGA TGCTAATCGC GGGGCGATTA GAATGAGCTC TGTTACCGCC
GGAGGAGGGA CGAATACACG TCACACTCAG TTTTGTCACA AACGTAAGTA CCTAGAAGGA
ACCTATGCAT CGAGAGTGTT CTTCCGTGAC ACACCAACTT ATGGGCCAGA TGGAGATGAA
GTTATTCAAA CTTTCTATAC CATTAGTCCG CTAGAGTTCC CATTAGATCC CAGTTACAGC
GAAGTCGATT TTGAGTACCT GCCCAATGGT GGCTGGGGCA GTGACAGCTC ACCAGCCATG
TGGACGACCA CTTGGGAAAC ATTTCAACTT GAGCCTTGGA CTAAAGTTAA CGAGTACACA
AGAAAAGAAG GAAGTTATGC CGGCTGGAGA ATATTGGTAA TGACCGTAGA AAAAGATGAG
GTCAATTATT ATGTTGACGG CAAGCTTATC TCTACTCATT CCGAGAACGT GGCTCCAGAG
AAGCTGATGT CGATTAACTT CAATTTATGG TTCATGCCTA AAGGTGCCGA TGGTTCTATT
GGTCCAGTAG ATTCTGATGA GTTAAGAGAG TACCAGCAGG ATATAGATTG GGTTTTTCAT
ATTGCGAATG ACATTATCAC TCCACAGCAG GTGTTAAATC AGGTCGCTAG TCTACAAGCG
CAAGACATTA AACATATTGA TGGTGTAGCA GAAAGAAGAC CTGCTTTGCC TTCTCCCTGT
GGATTATAA
 
Protein sequence
MMNTLQSLSI LTFAVSLGFS NFSQANQSQA NQSQEGNEQV FFDEFSYTDV KSFNSNGWKA 
RTETGHPGIA GATWSAEGLS FHPELKDANR GAIRMSSVTA GGGTNTRHTQ FCHKRKYLEG
TYASRVFFRD TPTYGPDGDE VIQTFYTISP LEFPLDPSYS EVDFEYLPNG GWGSDSSPAM
WTTTWETFQL EPWTKVNEYT RKEGSYAGWR ILVMTVEKDE VNYYVDGKLI STHSENVAPE
KLMSINFNLW FMPKGADGSI GPVDSDELRE YQQDIDWVFH IANDIITPQQ VLNQVASLQA
QDIKHIDGVA ERRPALPSPC GL