Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3156 |
Symbol | |
ID | 5663545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3860859 |
End bp | 3861824 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641237809 |
Product | lipoyl synthase |
Protein accession | YP_001503007 |
Protein GI | 157962973 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000010408 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAGGC CTGAAAGATT ACAACCTGGC GTTAAACTAA GAGACGCAGA CAAGGTTTCC CGCATTCCAG TGAAAGTGGT GCCATCTGAA CGTGACACCA TGTTGAGAAA GCCTGACTGG CTTCGAGTTA AGCTACCAGC ATCAAATCAG CGCATTACTG ATATTAAGCA AGCCCTGCGC AAAAATGGCT TGCACTCTGT ATGTGAAGAG GCATCTTGTC CAAATCTATC TGAGTGTTTC AACCACGGTA CTGCTACCTT CATGATTTTA GGTGCCATCT GTACCCGCCG TTGCCCATTT TGCGATGTAG CTCATGGCCG CCCGCTAAAA CCTGATGCCG AAGAACCGAA GAAACTAGCG CAAACCATCA AAGACATGAA GCTTAAATAC GTGGTCATCA CCTCTGTAGA CCGTGATGAC TTGCGTGACG GTGGCGCGCA GCATTTTGCA GACTGTATTC GCGAAATTCG CTTACTCAAC CCAGAAATTA AGATTGAAAC CTTAGTACCT GACTTCCGCG GCCGTATCGA TGCAGCGCTT GAGATCTTAG CAACCGAGCC ACCTGATGTG TTTAACCACA ACTTGGAAAC GGCGCCGATG CATTACCGTA AGGCTCGCCC AGGTGCTAAT TATCAATGGT CATTAGATCT ATTGAAGAAG TTTAAAGAGC GTCACCCTAA CATTCCGACT AAATCAGGTC TGATGATGGG TCTTGGTGAG ACTAACGAAG AGATTGCTCA AGTATTGCAT GATCTACGAG CTCACAACGT TGAGATGCTA ACCTTAGGTC AGTACTTACA GCCTTCTAAA TTCCATCTAC CAGTAGAGCG CTATGTATCA CCAGCAGAAT TTGATGAGCT AAAAGAACTG GCCGAAAGCA TCGGCTTTAC CCATGCAGCA TGTGGTCCAC TGGTACGCTC AAGCTACCAT GCAGATCTTC AAGCACAAGG TAAAGAAGTT AAATAG
|
Protein sequence | MNRPERLQPG VKLRDADKVS RIPVKVVPSE RDTMLRKPDW LRVKLPASNQ RITDIKQALR KNGLHSVCEE ASCPNLSECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAEEPKKLA QTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRLLN PEIKIETLVP DFRGRIDAAL EILATEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKK FKERHPNIPT KSGLMMGLGE TNEEIAQVLH DLRAHNVEML TLGQYLQPSK FHLPVERYVS PAEFDELKEL AESIGFTHAA CGPLVRSSYH ADLQAQGKEV K
|
| |