Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3151 |
Symbol | |
ID | 5663540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3856668 |
End bp | 3857666 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237804 |
Product | lytic murein transglycosylase B |
Protein accession | YP_001503002 |
Protein GI | 157962968 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000109427 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACTAT TAAAACGCAT GCTTGCCCCT TTGGCATTAA CCTTGTTTTC ATGCTCAGCT GCAGCAGCAC CTTCAGACTC TGAAGTCGAA GCACTAAAAG CCGAATTTAT CAAAACCCAG AGTGGCAAGG GGTTTGATGC CGAAGACACC ACTATTTTCA TCAAAAATGC AAAGTATAAC CAAGCCGTTA TCGATGCCAT GACCAAGCCT TGGGAAGCCA AACCTTGGCA TCAGTATTAT CCAATATTCT TAACTGAAAA GCGTCTAGAT GCGGGTCTTG CCTTCTGGAA AGAGCACGCA AAAACTATCG AACGAGCATC AAAAGAGTTT AATGTCGATC CACAGATTAT TGTGGCCATT ATCGGCATCG AAACTTTTTA TGGTGGTTAC ATGGGTAATT ACCCTGTTAA AGACGCACTC TATACCTTAG GTTTCCATTA TCCACCACGC GCCACCTTTT TTAGAAGTGA ATTCGCAAAT CTGCAGTCGC TAGTAAAAGA AGAGCGCTTA GATATCAATA GCCTCAAAGG CTCCTACGCA GGCGCAATGG GCTTTGGTCA GTTTATACCG TCAAGCTACC GCCATTACGC GGTCGATTTT GATAATGACG GCAGCCGCGA TCTACTTATC AGCACCACAG ATGCCATTGG TAGTGTGGCT AACTATTTTC ATCAGCATGG TTGGCAAAAA AACCAGCCAG TAACTCTTCA ATTAACCTTG AATAAAGACT TACCTGATAC AGTCAAAACC TGGTCTGGGG AGAAACTGCA TTATCAGGTT GCCGATATCC TATCGCCAAA TGTCGCACTT GCTGAATCAA TAGATCTCGA CGTATCGCAA CCGGCTCTAG TGGTTAAACT CGAGCAAGCC GAACATGATG AGTATTGGCT AGGCCTTAAA AACTTTTATG TTATCACCCG TTACAACCGC AGCCCTCTGT ATGCCATGGC CGTGTACCAG TTTAGCCAGG AATTAAAGAA AGCCTATGCC ACGCAATAA
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Protein sequence | MTLLKRMLAP LALTLFSCSA AAAPSDSEVE ALKAEFIKTQ SGKGFDAEDT TIFIKNAKYN QAVIDAMTKP WEAKPWHQYY PIFLTEKRLD AGLAFWKEHA KTIERASKEF NVDPQIIVAI IGIETFYGGY MGNYPVKDAL YTLGFHYPPR ATFFRSEFAN LQSLVKEERL DINSLKGSYA GAMGFGQFIP SSYRHYAVDF DNDGSRDLLI STTDAIGSVA NYFHQHGWQK NQPVTLQLTL NKDLPDTVKT WSGEKLHYQV ADILSPNVAL AESIDLDVSQ PALVVKLEQA EHDEYWLGLK NFYVITRYNR SPLYAMAVYQ FSQELKKAYA TQ
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