Gene Spea_3130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3130 
Symbol 
ID5663519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3833116 
End bp3834090 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content46% 
IMG OID641237770 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_001502981 
Protein GI157962947 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.0000000268526 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCATA CGCCTGAGGT TCCTACAGTG CCTGACATTA AACTTTTTGC CGGTAACGCT 
ACACCTAGTC TCGCTAAGAA GATAGCCGAT CGTCTATTTT GTAAACTTGG AGACGCAGAA 
GTAGGCGTTT TCAGTGACGG CGAAATCAGT GTCCAAATTA ATGAAAATGT ACGTGGTGCG 
GATGTATTCA TCATTCAATC TACTTGCGCT CCTACTAACG ATAACCTAAT GGAACTTATC 
GTTATGGTTG ACGCGCTTCG CCGTGCATCA GCTGGTCGTA TTACAGCGGT TATTCCTTAC 
TTTGGTTACG CGCGTCAGGA CCGTCGAGTT CGTAGTGCTC GTGTACCGAT TACAGCTAAA 
GTTGTTGCCG ATTTCCTATC AAGCGTTGGT GTTGACCGCG TATTGACATG TGATCTACAC 
GCAGAGCAAA TCCAAGGTTT CTTTGACGTT CCAGTTGATA ACGTATTTGG TAGCCCTGTT 
CTACTTGAAG ACATGTTAGC TAAGAACCTA GAAAACCCTG TTGTTGTTTC TCCTGATATC 
GGTGGCGTTG TGCGCGCTCG CGCAGTCGCT AAGCTACTTG ATGACTCTGA TTTAGCAATT 
ATCGATAAGC GTCGCCCACA AGCGAACGTT GCTCAGGTTA TGCATATCAT TGGTGACGTT 
CAAGGCCGTG ACTGTATCAT CGTTGATGAT ATGATCGACA CTGGCGGTAC GCTATGTAAA 
GCTGCTGAAG CACTTAAAGA GCACGGTGCA AACCGCGTAT TCGCTTACGC AACTCACCCT 
GTTTTCTCTG GCAACGCTGC TAAGAACATC GCTGAGTCTG TAATCGATGA AGTAATCGTA 
ACCGATACGA TTCCATTGAG CCCAGAAATT GCTGCTCTAG ACAAAGTTTC ACAGTTAACT 
ATGTCTACAG TTATGGCTGA AGCTATTCGC CGTGTAAGCA ACGAAGAATC AATCTCTGCA 
ATGTTCAAGC ACTAA
 
Protein sequence
MKHTPEVPTV PDIKLFAGNA TPSLAKKIAD RLFCKLGDAE VGVFSDGEIS VQINENVRGA 
DVFIIQSTCA PTNDNLMELI VMVDALRRAS AGRITAVIPY FGYARQDRRV RSARVPITAK 
VVADFLSSVG VDRVLTCDLH AEQIQGFFDV PVDNVFGSPV LLEDMLAKNL ENPVVVSPDI 
GGVVRARAVA KLLDDSDLAI IDKRRPQANV AQVMHIIGDV QGRDCIIVDD MIDTGGTLCK 
AAEALKEHGA NRVFAYATHP VFSGNAAKNI AESVIDEVIV TDTIPLSPEI AALDKVSQLT 
MSTVMAEAIR RVSNEESISA MFKH