| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3129 |
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| Symbol | ipk |
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| ID | 5663518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3832224 |
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| End bp | 3833078 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237769 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_001502980 |
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| Protein GI | 157962946 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000847697 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAGCGT CACTTTCATT AGGCTGGCCG GCTCCGGCTA AACTAAACCT ATTTCTACAT
ATCAACGCTC AGCGTCATGA CGGCTATCAC GAACTGCAAA CTCTGTTTCA GTTTATCGAA
CATTGTGACT ATCTAGACTT CAAAGTGTTA GATACGCCAA AGCTGAAATT ACATTCGAAT
ATGTCATCAG CTGTTGCCGA CAGCGATAAC TTAATTCTCA AAGCCGCAAA ATCGCTGCAA
CAACGAACAG ATTGTCAGCT AGGGGCTGAA ATTTGGCTAG ATAAACGCCT TCCTATGGGC
GGCGGTCTCG GCGGCGGTTC CTCCGACGCA GCCACCACGC TAGTCGCACT TAATCAACTA
TGGGAAACAG GATTGTCGCT ACGAGAGCTC GGTGAAATAG GCTTAAAGCT TGGCGCAGAT
GTTCCTGTTT TTATTAATGG TTTTTCAGCA TTTGCCGAAG GTGTAGGCGA AAAATTGCAA
AACGTTGAGC CCGCCGAGCC TTGGTATCTG GTGTTGACTC CCCAAGTACA TGTTTCTACG
GCTGAAGTCT TTCAAGACCC AGACCTACCT CGAAACACGC CAAAGTTAAG TCTCGAGTCA
TTGATGAACA GCCCATGGCA AAATGACTGC CAAACATTAG TCGCAAAACG CTACCCTCAA
GTTGCCAAAA CCTTAGCGTG GCTGCTAGAA TATGCGCCGT CCAGAATGAC CGGAACAGGA
GCATGTGTTT TTGGTCAATT CGAACAGGAG CAAGAAGCTA AAGATGTATT GGCGAAGTTG
CCTGCATCGA TACAAGGCTT TGTTGCGAAA GGGGCAAATA TATCACCGTT GATGCTGAGA
TTAGCTCAGT GTTAA
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| Protein sequence | MTASLSLGWP APAKLNLFLH INAQRHDGYH ELQTLFQFIE HCDYLDFKVL DTPKLKLHSN
MSSAVADSDN LILKAAKSLQ QRTDCQLGAE IWLDKRLPMG GGLGGGSSDA ATTLVALNQL
WETGLSLREL GEIGLKLGAD VPVFINGFSA FAEGVGEKLQ NVEPAEPWYL VLTPQVHVST
AEVFQDPDLP RNTPKLSLES LMNSPWQNDC QTLVAKRYPQ VAKTLAWLLE YAPSRMTGTG
ACVFGQFEQE QEAKDVLAKL PASIQGFVAK GANISPLMLR LAQC
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