| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3100 |
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| Symbol | |
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| ID | 5663489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3802384 |
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| End bp | 3803016 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641237740 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit D |
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| Protein accession | YP_001502951 |
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| Protein GI | 157962917 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1347] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrD |
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| TIGRFAM ID | [TIGR01939] NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGATG CTAAAGAACT TAAACAGGTT CTAATCGGAC CTATTGTCAG CAACAACCCA
ATTGCTTTGC AAATTCTGGG TGTATGTAGT GCTTTGGCTG TAACCAGTAA GATGGAAACG
GCATTGGTAA TGACGATTGC ACTTACTGCG GTATGTGCGC TATCGAATCT ATTTATTTCA
TTGATTCGTA ATCACATTCC AAGCAGCGTA CGTATTATCG TACAGATGAC GATTATTGCG
TCATTGGTAA TCGTGGTTGA CCAAGTACTG CAAGCTTACG CTTACGATGT TGCTAAGCAA
TTATCGGTAT TTGTTGGTTT GATTATTACT AACTGTATCG TAATGGGCCG TGCGGAGGCT
TATGCGATGA AGACACCTCC AATGATGAGT TTCATGGACG GTATTGGTAA TGGTCTAGGC
TACGGTGCAA TCTTGTTGTC AGTTGGCTTC GTACGTGAAT TGTTTGGTAA TGGTTCATTA
TTCGGCATTG AAATCTTAAG CAAGATTTCA GACGGTGGCT GGTATCAGCC TAACGGCCTA
TTGCTTCTGC CTCCGAGCGC GTTCTTCCTG ATTGGTGCAT TGATCTGGAT TATTCGTGTG
ATGAAGCCAG AGCAAGTTGA AGCGAAAGGA TAA
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| Protein sequence | MADAKELKQV LIGPIVSNNP IALQILGVCS ALAVTSKMET ALVMTIALTA VCALSNLFIS
LIRNHIPSSV RIIVQMTIIA SLVIVVDQVL QAYAYDVAKQ LSVFVGLIIT NCIVMGRAEA
YAMKTPPMMS FMDGIGNGLG YGAILLSVGF VRELFGNGSL FGIEILSKIS DGGWYQPNGL
LLLPPSAFFL IGALIWIIRV MKPEQVEAKG
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