| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3097 |
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| Symbol | |
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| ID | 5663486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3799429 |
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| End bp | 3800445 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641237737 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_001502948 |
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| Protein GI | 157962914 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGA CCTTAGTAAA CTGGCTGGCC CTTATCGGGT TAGCCTTTTT TATTTCAGCT
TGTACTAAAC AAGCTGAAGT GATTTCACTG TCTGGCAACA CTATGGGCAC GACTTACCAT
ATTAAGGTCG TTCCTAATGA CAGAATGCCA GATGTTCAGT TACTGCAAGC AGAGATCGAT
TTAGCCTTAG AGAATGTTAA CGATCAGATG TCGACTTATC GTCCTAACTC TGAGTTATCT
AAGTTTAACC AGATGACTCG CCACGATAAG GTTGAAGTGT CGGCGGACAC TGCCAAGGTA
ATTGCTGAAG GATTAGCATT ATATAAAACC ACTGATGGTG CCTTAGATAT TACTCTGGGG
CCGTTAGTCA ATTTATGGGG CTTTGGCCCG GATAAACGAC CGACTCAAAT TCCATCTCAA
CAAGCTATCG ATGCCGCTAT GGATCGCACA GGTATTGAAG CGATAGAGGT CGATGGTAAT
AGGATCAGTA AACAAAACCC TGATATTTAT GTCGACTTGT CTTCTATTGC AAAAGGCTTC
GGTGTTGATA AAATAGCCGC CTTATTAGAT AAGTATCAGC CGACGGGCTA TTTAGTTGAG
ATAGGTGGCG AGATCAGCCT ACGTGGCACT AAAGCCGATG GCACTCTATG GCGTATTGCG
ATTGAGCAAC CTGGCGATGC TGGTGGGGCA ATCCAACAAG TCATCTCACC CAAGAATATG
GCGATGGCAA CATCCGGTGA TTATCGTAAC TATTACGAGG AAGACGGAAA ACGTTTTTCA
CACCTGATCG ACCCACGCAC AGGCTACCCG ATACACCATA GGTTAGCGTC GGTAACAGTA
CTGCATCAAG AATCTATGAT TGCAGATGGC TACGCGACTG CTATGATGGT GCTAGGTACC
CAAGCGTCAC TAGAACTTGC TAAACGTGAG CATCTAGCGA TAATGCTTAT TGAAAAGCAA
GATGATGGCT TTAAAGTTTT CTATAGTGAA GCTTTCAAAC CTTTCGTTAC TCAGTAG
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| Protein sequence | MFKTLVNWLA LIGLAFFISA CTKQAEVISL SGNTMGTTYH IKVVPNDRMP DVQLLQAEID
LALENVNDQM STYRPNSELS KFNQMTRHDK VEVSADTAKV IAEGLALYKT TDGALDITLG
PLVNLWGFGP DKRPTQIPSQ QAIDAAMDRT GIEAIEVDGN RISKQNPDIY VDLSSIAKGF
GVDKIAALLD KYQPTGYLVE IGGEISLRGT KADGTLWRIA IEQPGDAGGA IQQVISPKNM
AMATSGDYRN YYEEDGKRFS HLIDPRTGYP IHHRLASVTV LHQESMIADG YATAMMVLGT
QASLELAKRE HLAIMLIEKQ DDGFKVFYSE AFKPFVTQ
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