| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3087 |
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| Symbol | |
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| ID | 5663477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3787762 |
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| End bp | 3789579 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641237728 |
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| Product | ATP-dependent OLD family endonuclease |
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| Protein accession | YP_001502939 |
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| Protein GI | 157962905 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA ATAAGGTAGA AATAGAGAAC TTCCGTGGTA TTACTGAAGC CGTAATCGAC
TTAAACAACT TTACCACTCT AGTTGGCCCA AACAATATTG GTAAATCAAC AATCTTGGCG
GCACTAAACC TAGTCTTAGA CAACAAAAAG CCAAAAGCCG ATGACTGGCC AAGTCAGAAG
CAAACTGATG ACGTTATGTC TATTACTTGT ACATTCTCTG AACTTGAAGA GTGGGAGCGT
AATAAGCCTG CTATATCTCA ACTTTTAAAT GGCGACCAAT TAGTTTTAAA AATGGAAGCC
ACTTGGGCAG AAGATACAGA TGCGCCAAGC TGCAAGTACT TAGTGCATCA CGCACCTACG
ACCACTCCCT TTACAGGTAA GAACATTTCC CAAGCGCGTG CTGATGAGCA ACTGAATGCA
ATCCTAGTTG AACTTGAGGT AACATCGGCT GCTATATATA AAGAGCGAAA AAGTGAAATA
GACCAATATA TGGTCGATAA TCATCCAGAA ACTATTATTC GTGAATTAGA TTGGCATGAG
AAGACATTCG CAAACTCTCT TCAACAAGCA ATACCTCACG TCATGTATGT ACCTGCTAGC
TTCAAGATTG AAGACGAGCT AAAAACGACA GGTACTTCCC CGTTTGCATA CTTATTTAAA
AACAAACTTT TTCCTAAAGT GAAATCTGAT GAATCCTACA CTCTTTATAT TGAGAAGGCT
CAGAAGCTAC AAGAAAAGCT TAAAGGTCAG GCTGAAGATG GTACTGAAAT TGATGGTCTA
TCAACTGCTT TGGAAGCTGT TTCTACTACC TTGAATGATA TTTTGGACTT TGATACCAAG
GTTAAACTTG CTGTTGGAGA TATCGATATT GAACCATTAT TCATGAAAGC TGCGACATTC
TTGATTGATG AAGAGTTAGA AACTAGCCTT CAATATCAAG GCAGTGGTGT ACAACGAGCA
CTCGCATTTG CAATGTTAGA AAGCAATGCC GCGACCGAAG CACAAGTCGA TGGTGCTCAA
AGAACAACGA TTGTTTTGTA TGAAGAACCG GAACTTTATA TCCATCCTCA CCTAATGCGT
CGATTACGAG ATACACTTCA AACAAGATCT GGTAGTCCAC TATGGCAAGT AATTTGTTCG
ACCCACTCAC CATTTCTAAT TGATTTAGCA AATAGGCCGG AGTCGATTAA ATTAATTAAA
CGAGCTGACA ACAATAGACG TATCGTTTCA CAGTTACCAA GCGAGCTGTT CGAGCAAAGT
GCAGAATATG ACGAAAAAGT CATGTTAAGG GCTGTCCTAG ATTTTCATCC ATCAGTCTGT
GAAAGTCTAT TCGCCAAACG AGTTGTTGTG GTTGAAGGCG ACACCGAAGT TGCTGTGTTC
TCTATGATTG GAGAGTTAGT CGAAGAACTG AACGTATTAG GCTCGAAACA CAAAGATACA
ACGGTTGTTT CAGCAGGAGG TAAATGGACA ATTACCGCTA TAGTTAAAGT TCTAAAAGGG
CTTGGGATAG ACTACAAAGT AATCCATGAC ACGGACAGAA AAGGCCTCAC TGATGCTGAA
CTTGCCGAGG CAGGTAACCT ACATCCTTTT AAAGCTAATG CGAAGATTGA GGAAATTGCT
CTACGCGAAA ATGTTTTCTT AGTACAAGAT ACATTTGAAC ACGTGTTATG GAATGTTGAG
ACTGACAACA TCAAAGCTAG TAGCAAACCA TTCCATTCAT GGAAAAGGAT AAGACAGTTC
TTAGATGGTG ACAATGATTT ATCTGTTGAG AGTAAAGCCA CTTTAAAAGA GATTATTGAG
TTTGCTTTCT GTGACTAA
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| Protein sequence | MKINKVEIEN FRGITEAVID LNNFTTLVGP NNIGKSTILA ALNLVLDNKK PKADDWPSQK
QTDDVMSITC TFSELEEWER NKPAISQLLN GDQLVLKMEA TWAEDTDAPS CKYLVHHAPT
TTPFTGKNIS QARADEQLNA ILVELEVTSA AIYKERKSEI DQYMVDNHPE TIIRELDWHE
KTFANSLQQA IPHVMYVPAS FKIEDELKTT GTSPFAYLFK NKLFPKVKSD ESYTLYIEKA
QKLQEKLKGQ AEDGTEIDGL STALEAVSTT LNDILDFDTK VKLAVGDIDI EPLFMKAATF
LIDEELETSL QYQGSGVQRA LAFAMLESNA ATEAQVDGAQ RTTIVLYEEP ELYIHPHLMR
RLRDTLQTRS GSPLWQVICS THSPFLIDLA NRPESIKLIK RADNNRRIVS QLPSELFEQS
AEYDEKVMLR AVLDFHPSVC ESLFAKRVVV VEGDTEVAVF SMIGELVEEL NVLGSKHKDT
TVVSAGGKWT ITAIVKVLKG LGIDYKVIHD TDRKGLTDAE LAEAGNLHPF KANAKIEEIA
LRENVFLVQD TFEHVLWNVE TDNIKASSKP FHSWKRIRQF LDGDNDLSVE SKATLKEIIE
FAFCD
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