| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3079 |
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| Symbol | |
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| ID | 5663469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3776761 |
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| End bp | 3777891 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237720 |
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| Product | chaperone protein DnaJ |
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| Protein accession | YP_001502931 |
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| Protein GI | 157962897 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
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| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000309129 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAGC GCGATTATTA CGAAGTATTA GGTGTCGGAC GAGACACTAG CGAACGCGAA
ATTAAGAAAG CTTATAAGCG TTTAGCAATG AAATTTCACC CAGACCGTAA TCCGGGTGAC
AAGGAAGCTG AAGCTAACTT TAAAGAAGTT AAAGAAGCTT ACGAAATCCT AACCGATAGC
GATAAGAAAG CGGCTTATGA TCAGTTTGGT CACGCTGGCG TCGATCCTAA TCGCGGCGGT
GGCGGCTACG GTGGCAGCGC TGATTTCGGC GACGTTTTCG GTGATGTTTT TGGTGATATC
TTTGGTGGCG GACGCCGCGG TGGTCAACGC CAAGCAGCCC GTGGTAGTGA CTTACGTTAC
AACCTTGAAT TGTCTCTTGA AGAAGCGGTT CGTGGTTTAA CTAAAGAGCT ACGTATTCCA
ACGCTAGCAG CCTGTGACTC TTGTGACGGT AGCGGTGCGA AGAAAGGTTC ATCTCCAACC
ACTTGTGGTA CCTGTCATGG CCAAGGTCAA GTACAGATGC GTCAAGGTTT CTTTGCTGTA
CAGCAGGCGT GTCCTACCTG TCATGGCCGT GGCAAGATCA TTAAAGATCC TTGTAACAAG
TGTCATGGTG AAGGCCGCGT AGAGAAGAGT AAGACGCTTT CAGTTAAGAT CCCTGCGGGT
GTTGATACTG GCGATCGCAT TCGTCTTTCT GGCGAAGGTG AAGCGGGCGA GTACGGCGCA
CCTCCAGGTG ACTTATACGT ACAAGTTAGC GTACGCGAGC ATGCAATCTT CCAGCGTGAT
GGTAATAACC TTTACTGTGA AGTGCCTATC TCATTCAGCA AGGCTGCCCT AGGCGGCGAG
ATTGAAGTGC CAACACTCGA TGGCAAAGTT AATCTTAAGA TCCCTGCAGA AACGCAAACC
GGCCGTATGT TCCGTATGCG AGGTAAAGGC GTTAAGTCTG TTCGCAGCCA TGCTGTAGGT
GACTTGTTAT GTAAGGTTGT GATGGAAACG CCTGTCAACC TTAACGAACG TCAAAAAGAG
TTACTTCGTG AATTTGAAGA CACCTTAACC GGTCAGTCAA AGAAGCACAG CCCTAAGGCT
GAAGGTTTCT TCGATGGCGT GAAGAAGTTT TTTCAAGATC TGAATAGCTA A
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| Protein sequence | MSKRDYYEVL GVGRDTSERE IKKAYKRLAM KFHPDRNPGD KEAEANFKEV KEAYEILTDS
DKKAAYDQFG HAGVDPNRGG GGYGGSADFG DVFGDVFGDI FGGGRRGGQR QAARGSDLRY
NLELSLEEAV RGLTKELRIP TLAACDSCDG SGAKKGSSPT TCGTCHGQGQ VQMRQGFFAV
QQACPTCHGR GKIIKDPCNK CHGEGRVEKS KTLSVKIPAG VDTGDRIRLS GEGEAGEYGA
PPGDLYVQVS VREHAIFQRD GNNLYCEVPI SFSKAALGGE IEVPTLDGKV NLKIPAETQT
GRMFRMRGKG VKSVRSHAVG DLLCKVVMET PVNLNERQKE LLREFEDTLT GQSKKHSPKA
EGFFDGVKKF FQDLNS
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