| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3062 |
|---|
| Symbol | |
|---|
| ID | 5663452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3757370 |
|---|
| End bp | 3757825 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641237701 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502914 |
|---|
| Protein GI | 157962880 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000525096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCTACAT TAGAACGCAA ACTGGTAGAG ATGCTCAAAG CGCCAGTTGA AGCATTAGGC
CACAAGCTTT GGGGTCTGGA ATATATTCAA GCAGGCAAGC ATTCTATCTT GCGTCTATAT
ATAGACAACG AAAAAGGCAT CTTCATTGAA GATTGCGCCG AAGCAAGCCG CCAAGTCAGT
GCTGTTATGG ACGTTGAAGA TCCAATCTCA ACGGAATACA CATTAGAAGT TTCTTCTCCT
GGTGTAGATA GACCTTTGTT TACTGCTGAG CAGTACCAGG CCTACATTGG TGAGACTGTA
AAAGTACAAC TAACGATGCC TGTTGCAGGC AGTCGTAATT TAAAAGGCAC TGTTACTGGC
GTAGATGGGC AAATGCTTAA TCTGTCGGTA GATGGGAATG AACTTATCGT TGCTTTGGAT
AATATCCGTA AAGGCAACTT AATCGCTAAG TTTTGA
|
|---|
| Protein sequence | MATLERKLVE MLKAPVEALG HKLWGLEYIQ AGKHSILRLY IDNEKGIFIE DCAEASRQVS
AVMDVEDPIS TEYTLEVSSP GVDRPLFTAE QYQAYIGETV KVQLTMPVAG SRNLKGTVTG
VDGQMLNLSV DGNELIVALD NIRKGNLIAK F
|
|---|
| |