| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3050 |
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| Symbol | |
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| ID | 5663440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3741294 |
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| End bp | 3742553 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237689 |
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| Product | nucleoside transporter |
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| Protein accession | YP_001502902 |
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| Protein GI | 157962868 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000162905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATTT TAATGAGTTT AGTAGGGGTG GTCACCCTAC TGGCGATAGC TTTCGGGTTA
TCAAACAATA GAAAAGCAAT TAACAAACGT ACCGTTTTTG GTGCATTAGC AATTCAAGCC
GCATTCGGTG GTTTTGTTTT GTATGTTCCA GTCGGTAAAG ACATTCTGCA AGGAATGTCG
GATGCAGTAT CTAGTGTTAT TGGATACGCT CAAAGTGGTA TTGGTTTCTT ATTCGGTGAT
TTAGCTAACT TCAAAGTTGG CTTTATTTTT GCCATTAACG TACTGCCAAT CATCGTTTTC
TTCTCTTCTT TAATCGCAGT TCTTTACTAC TTAGGCATCA TGCAGTGGAT CATCCGTATT
ATCGGTGGTG CGCTACAAAA AGCATTAGGC ACAAGTCGTA CTGAGTCAAT GTCAGCTACA
GCTAACATCT TCGTTGGTCA AACAGAAGCG CCACTAGTTG TTCGTCCGTT TATCGCGACG
ATGACTAACT CTGAGCTATT CGCAGTTATG GTTGGTGGTC TTGCATCTAT CGCGGGTTCA
GTTATGGCTG GTTACGCGCA GATGGGTGTA CCTATCGAAT ACTTAGTTGC CGCTTCATTC
ATGGCAGCAC CAGCAGGCCT ATTAATGGCT AAGCTGATGC ACCCTGAAAC AGAAGAAGCT
AAGAACGACA TGAGCGACTT ACCAGAAGAT CCTGATAAGC CAGCTAACGT TCTTGACGCT
GCGGCTGCAG GTGCTTCATC TGGTATGCAC CTTGCGCTAA ACGTTGGTGC AATGCTTCTA
GCCTTCGTTG GTTTGATCGC TATGGTTAAC GGCATCATCG GTGGTATCGG CGGATGGTTC
GGTATGGAAG GCTTAACACT AGAATTGATT CTAGGTTATA TCTTCATGCC TCTAGCATTC
CTTATCGGTG TACCTTGGAA CGAAGCTCTT GTTGCTGGTT CTTTCATCGG TCAGAAGATT
GTCATTAACG AATTCGTTGC TTACCTAAAC TTTGCTCCAT ACCTAAAAGA CTTAGCTGAC
GGCGGTATGG TAGTTGCAGA GACTGGTGTA GCCATGTCTG ACCGTACTAA AGCTATTATC
TCTTTCGCTC TATGTGGTTT CGCTAACCTA TCTTCAATCG CGATTCTACT TGGTGGTCTA
GGTTCTATGG CTCCGACTCG TCGCCATGAC CTAGCTAAGC TTGGTATCCG TGCGGTTATC
GCTGGTTCTC TAGCTAACTT AATGAGTGCA ACACTTGCTG GTCTATTCCT AGCACTGTAA
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| Protein sequence | MDILMSLVGV VTLLAIAFGL SNNRKAINKR TVFGALAIQA AFGGFVLYVP VGKDILQGMS
DAVSSVIGYA QSGIGFLFGD LANFKVGFIF AINVLPIIVF FSSLIAVLYY LGIMQWIIRI
IGGALQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIAT MTNSELFAVM VGGLASIAGS
VMAGYAQMGV PIEYLVAASF MAAPAGLLMA KLMHPETEEA KNDMSDLPED PDKPANVLDA
AAAGASSGMH LALNVGAMLL AFVGLIAMVN GIIGGIGGWF GMEGLTLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VINEFVAYLN FAPYLKDLAD GGMVVAETGV AMSDRTKAII
SFALCGFANL SSIAILLGGL GSMAPTRRHD LAKLGIRAVI AGSLANLMSA TLAGLFLAL
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