| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3040 |
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| Symbol | |
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| ID | 5663430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3729023 |
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| End bp | 3730807 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237679 |
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| Product | histidine kinase |
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| Protein accession | YP_001502892 |
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| Protein GI | 157962858 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCTCGGT TGTTGCTTTG TATTTGTGTG CTTTTGTTTT CATCGGTGGC TTGGGCTAAG
CCGCAACAGT TCTATGTGGG CGTACTAGCA AACTGGGGGC ATCAGCAAGC AGTAGAGCGT
TGGACACCTA TGATGCAGTA TCTCAATGAG CAGGTGCCTG ATGCCGAGTT TCATGTGTAC
CCGGGAAACT TTGAGGCGCT AAATTTAGCC ATGGAGTTGG GGCAAATTCA GTTCATCATC
ACCAACCCTG GACAATACCT ATACCTCTCT AATCAATATC CCCTGTCTTG GCTTGCAACC
ATGCGTTCCA TGCGCCACAG GGGCACGACC TCGGCCATTG GCTCGGCGAT CATTGTTAAG
GCCGATAGTG AGTATCGTAC TCTGTATGAT TTAAAGGGAA AAATTGTTGC GGCGAGTGAT
CCTCATGCGC TAGGTGGATA CCAAGCAACA GTGGGTTTGA TGCACAGCTT AGGCATGGAT
CCTGAAACCT ACTTTGGCCA GACCAAGTTC CTAGGCTTTC CCCTTGACCC TTTGCTTTAC
CAAGTGCGAG ACGGCAATGT GGATGCGGCC ATTACCCCTT TGTGCACTCT AGAAGACATG
GTGGCGCGTG GATTAATTCA GCGCGGGGAG TATCGAGTGC TCAATCCGAG CCGCCCCGAA
GGAGTAGAGT GCCAGTGCAG TACCACCTTG TATCCCAACT GGTCATTTGC CGCGACTGAG
AGCGTCAGCA CTGAGCTTAG TAAAGCGATC ACCCAGGCTT TGCTTGATTT GAGCGCCGAT
AACCCGGCAG CCATTCAAGC CCAGTTAAAG GGCTGGACAT CGCCTATTAG TCAATTAGCG
GTAATTAAAC TATTTAAAGA GCTGCATGTT CAGTCTCCAG ATAACAGCCG CTGGGATTCG
GTTGAGCAAT GGCTTAAGGA TAATCGTCAT TGGGGCATTT TATCTGTTTT AGTGTTTATT
ATTGCGACCT TGTATCACTT GTGGATTGAA TACAGATTTC ATCAAAAGAG CAGCTCCTTG
ATTGAGTCCG AGCGGCAATT AAAGCAGCAA GCGGTCGCGC TTGAGCGCTT ACAGAGTGCT
TCTATTATTG GTGAGATTGG TGCAGGCTTG GCCCATGAGA TAAACCAACC TATCGCGGCG
ATTACCAGTT ATAGCGAAGG TGGCATCATG CGCTTACAAG GCCAGCAGCA AGCCGATGTT
GAGTCTTGTA TCGCACTACT AGAAAAAATT CATAAACAAT CGACTCGTGC GGGTGAGGTA
GTACATCGAA TTCGCGGCTT GCTAAAGCGC CGAGAGGCGG TAATGGTCGA TGTGAATATT
CTTACCTTAG TCGAGGAGAG CATTTCACTA TTAAGGCTTG AGCTTGCAAG GCGCGAAATA
CAGATTAATA CTCAGATTAA GGGCGAACCA TTCTTTATTA CCGCCGACAG GGTCGGCTTA
TTGCAGGTGC TGATAAATCT TATTAAAAAT AGCTTAGATG CGATTGCTGA CAGTGAGAAT
GCCCGTGTTG GTAAAATTAA TATTGAGCTG GATTTTAAAG AGTATCAAGT GAATGTGCGT
ATTACCGATA ATGGTCCCGG CTTAGCATTG GACTCAGACA CGGTTATGGC AACCTTCTAC
ACCACAAAGC TTGATGGTTT AGGCCTTGGG CTTGCCATCT GTAGAGAGGT GGTTAACGAC
CATAATGGAC ACTTTTTACT GAGTAATAGG GAGGATGATG CTTTAGGCTG CGTGGCAAAG
GTTTACTTGA AGAAGCGTGG TAGCGAAGCA CCCATTGAAG TTTAG
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| Protein sequence | MSRLLLCICV LLFSSVAWAK PQQFYVGVLA NWGHQQAVER WTPMMQYLNE QVPDAEFHVY
PGNFEALNLA MELGQIQFII TNPGQYLYLS NQYPLSWLAT MRSMRHRGTT SAIGSAIIVK
ADSEYRTLYD LKGKIVAASD PHALGGYQAT VGLMHSLGMD PETYFGQTKF LGFPLDPLLY
QVRDGNVDAA ITPLCTLEDM VARGLIQRGE YRVLNPSRPE GVECQCSTTL YPNWSFAATE
SVSTELSKAI TQALLDLSAD NPAAIQAQLK GWTSPISQLA VIKLFKELHV QSPDNSRWDS
VEQWLKDNRH WGILSVLVFI IATLYHLWIE YRFHQKSSSL IESERQLKQQ AVALERLQSA
SIIGEIGAGL AHEINQPIAA ITSYSEGGIM RLQGQQQADV ESCIALLEKI HKQSTRAGEV
VHRIRGLLKR REAVMVDVNI LTLVEESISL LRLELARREI QINTQIKGEP FFITADRVGL
LQVLINLIKN SLDAIADSEN ARVGKINIEL DFKEYQVNVR ITDNGPGLAL DSDTVMATFY
TTKLDGLGLG LAICREVVND HNGHFLLSNR EDDALGCVAK VYLKKRGSEA PIEV
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