| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3032 |
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| Symbol | |
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| ID | 5663422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3716761 |
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| End bp | 3718134 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237671 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001502884 |
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| Protein GI | 157962850 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA ATAAAACAGC TTATGTATGT AATGAGTGTG GTCAAGATTT TCCTCGTTGG
CAGGGGCAAT GTAGTGCCTG TCAGGAGTGG AATACCATCA GTGAACTGAA AATTTCGGCG
CTAAAACCTG CTCGTGCTTC GGTCTCAGGC TATGCTGGCT CTGTGGGCGG TGGTTCGAAA
AAGTTAACCG AAATCGAAGA GTTTGAAGCG CAAAAGATGC TGACAGGCAT TGGCGAGCTT
GACCGAGTGC TTTGTGGCGG ATTGACCACA GGTTCGGTAA ACATCATTTC TGGTGACCCT
GGTGCAGGTA AGACCACGAT TTTATCAGAT CTGGTGTCGC GTATGTCGCA GTTAATGCCA
TCGCTTTATT GTACCGCAGA GGAGTCGTTA TCTCAGTTCA AAAACCGAGT TAACCGTCTA
AAGCTAGATT GCAATGAAGA CAACTTGTAC CTGATGGCCG AAACCAGTGT CGAAGCCATT
ATTGCCGAAC TTGAAGAGAA GAAGATTAAG TTTGCGGTTA TTGACTCTAT TCAGGCTGTT
GTGACCGATT TAGCTAACGG CAGTCCGGGC TCGCCTTCAC AGGTTAAGAG TAGTGCCCAG
GCTCTCACTC AGTATTGTAA GCAAAATAAC GTCACCATGT TTTTAGTGGC TCACGTTAAC
AAGAATAATG AAACTGCCGG GCCACAGACC CTAATCCATA TCGTCGATTG TTTAACTCAT
ATCGAGTGTA ACGACGGCCA AATTCGCACA CTTCGAGCCA ACAAAAACCG CTTCGGCGAT
GTCGATACCG TGGGCATTTT TAAGATGACC GAACGCGGCA TGATAAGTGT TGATAATCCG
AGTGAGATAT TTCTTTCCGG CTCCACAACA GAGTCACCCG GCGCGGCAAT TACCTGTATC
CGTAAGGGCA ATCGCAATTT ATTACTCGAG ATCCAGTGCC TAACCACAGA GACCGAAGCT
GAGTTTCCGC AGCGAGTTTG CGTAGGTTTG AATATGAACC GTATCAAGAT GCTAACTGGG
ATATTGCGTA AGCACACTAA GACCAAAATT TTCCACGATA CCTATTTTAA CTTGGTCGGT
GGTCTTAAAA TTGATGAGTC TGAAACTTGC ATCGACTTAG CCCTAGTGAC CGCACTGCTC
AGTAGTTTGA ATGATTTTGT GGTGCCAAGA ACCACATGCA TCATGGGGGA GCTGAGTTTA
AATGGGGATG TTCGCCCAAT TGACAGTGGT GTTCCGCGAG TTAAAGAGGC GATTCAACAT
GGTTTTACCG AGATTTATAT TCCATTTCGT AATTACCATA AGTCGATGGA AGGCTCGGGA
GCCAAGATTA TTCCGGTGAA GACGATCCAT GAACTGCTGG AGTTAATAAA CTAG
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| Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTISELKISA LKPARASVSG YAGSVGGGSK
KLTEIEEFEA QKMLTGIGEL DRVLCGGLTT GSVNIISGDP GAGKTTILSD LVSRMSQLMP
SLYCTAEESL SQFKNRVNRL KLDCNEDNLY LMAETSVEAI IAELEEKKIK FAVIDSIQAV
VTDLANGSPG SPSQVKSSAQ ALTQYCKQNN VTMFLVAHVN KNNETAGPQT LIHIVDCLTH
IECNDGQIRT LRANKNRFGD VDTVGIFKMT ERGMISVDNP SEIFLSGSTT ESPGAAITCI
RKGNRNLLLE IQCLTTETEA EFPQRVCVGL NMNRIKMLTG ILRKHTKTKI FHDTYFNLVG
GLKIDESETC IDLALVTALL SSLNDFVVPR TTCIMGELSL NGDVRPIDSG VPRVKEAIQH
GFTEIYIPFR NYHKSMEGSG AKIIPVKTIH ELLELIN
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