| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2970 |
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| Symbol | |
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| ID | 5663360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3637436 |
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| End bp | 3638386 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641237609 |
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| Product | porin |
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| Protein accession | YP_001502822 |
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| Protein GI | 157962788 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00088463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAACG TTTTCTGTAA AACTCTACTG GCTTCTGCTG TTGCGACTGC AACTATGTCT
TCTGCTTACG CGGCTGACCC ACTAACAGTT TACGGCAAGC TTAATGTGAC AGCTCAGTCA
AATGACGTAA ACGATGAATC AACAACTACG ATTCAATCTA ATGCTTCTCG TTTTGGTGTT
AAAGGTGCTT TCGAGTTAAG TAACTCGCTA GAAGCGTTTT ACACAGTAGA ATATGAAGTT
GATACCGGTG ATAGCAGCAA AGACAATTTC GAAGCACGTA ATCAATTTGT TGGTCTTAGA
GGTAACTTTG GTGCTTTCTC TGTAGGTCGT AACGACACTA TGCTCAAAGC TTCACAAGGT
AAGGTTGATC AGTTCAACGA CCTATCGGGT GATTTGAAGA ACTTGTTCAA GGGGGAAAAC
CGTATTGAAC AAACCGCAAC TTATATCACG CCATCTTTTG GTGGTTTCAA AGTTGGTGTA
ACTTACGCTG CTGAAGGCGC TAGCTCACAA TATACACAAG ATGGTTTCAG TGTTGCCGCC
ATGTACGGTG ATGCCAAACT TAAGAAGTCA CCAATCTACG CATCGGTTGC TTATGATTCG
GACGTAAAAG GCTATGAAGT TGCACGTGCA ACCGTACAAG GCAAGATTGC TGGTCTTAAG
TTGGGGGCTA TGTATCAGCA GCAGGAAGAG ACTTATAGCA AAGATGGTAC AGCCATTGTT
GGTAGCGAAA GCAAAACCGG TTACCTACTT AGTGCTGCTT ACCAAATTGA AGCCATCGTA
CTGAAAGCTC AGTATCAAGA CATGGAAGAC AAGGGTGACT CTTGGTCTTT AGGTGGTGAT
TATAAGCTAG GTAAGCCAAC TAAGTTGTTC GCTTTCTACA CAAATCGTTC ATTTGAGAAC
GTTGAAAATG ACGATAGCTA CTTCGGTATA GGTCTAGAAC ATAAGTTCTA A
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| Protein sequence | MMNVFCKTLL ASAVATATMS SAYAADPLTV YGKLNVTAQS NDVNDESTTT IQSNASRFGV
KGAFELSNSL EAFYTVEYEV DTGDSSKDNF EARNQFVGLR GNFGAFSVGR NDTMLKASQG
KVDQFNDLSG DLKNLFKGEN RIEQTATYIT PSFGGFKVGV TYAAEGASSQ YTQDGFSVAA
MYGDAKLKKS PIYASVAYDS DVKGYEVARA TVQGKIAGLK LGAMYQQQEE TYSKDGTAIV
GSESKTGYLL SAAYQIEAIV LKAQYQDMED KGDSWSLGGD YKLGKPTKLF AFYTNRSFEN
VENDDSYFGI GLEHKF
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