| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2935 |
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| Symbol | |
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| ID | 5663325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3595533 |
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| End bp | 3596222 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237574 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001502787 |
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| Protein GI | 157962753 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000047512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGATTGT TATTAGTTGA AGATGATTTA GAACTGCAAT CTAACCTCAA ACAGCACCTT
ATCGAGGCCA ATTATACCGT CGACACTGCA GATGATGGCG AAATAGGCCT GTTTCAGGGC
CGTGAATACA ATTACGATGC GGCGATTATC GATGTTGGCT TACCCAAGCT TGATGGCATC
GCCCTCATTA AAGAGCTTAG AGCGCTCGAT ATCGGCTTTC CTATTCTCAT TTTGACTGCC
CGTGATAGCT GGCAAGATAA GGTCGAAGGA CTAGACGCCG GCGCCGATGA TTACCTCACG
AAACCCTTTC ATCCTGAGGA ATTGGTCGCC AGATTAAAAG CCTTGATCCG CCGCTCTGCC
GGTAAGGCGA GCCCAATTGT TAGCAATGGG CCTTTTAGCC TAAACACCAG CAGTTTAGAG
ATCACCAAGT CTGGTGAAAC CATCACCTTG AGTGGCTCAG AGTACAAGTT ATTTGAGTAC
TTTATGCTGC ATATCGGCGA GGTGAAATCG AAAACCGTGC TAACAGAACA CATCTACGAT
CAAGATTTTG ATTTGGACTC CAACGTGATT GAGGTGTTTA TCAGACGCTT ACGCAAAAAA
CTCGACCCAG ATAATCAACT CGGCCTTATC GAAACTCTTA GAGGTCAAGG TTACCGTCTT
GTCTCACTCG ATAATGATGC TAAGAAATAA
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| Protein sequence | MRLLLVEDDL ELQSNLKQHL IEANYTVDTA DDGEIGLFQG REYNYDAAII DVGLPKLDGI
ALIKELRALD IGFPILILTA RDSWQDKVEG LDAGADDYLT KPFHPEELVA RLKALIRRSA
GKASPIVSNG PFSLNTSSLE ITKSGETITL SGSEYKLFEY FMLHIGEVKS KTVLTEHIYD
QDFDLDSNVI EVFIRRLRKK LDPDNQLGLI ETLRGQGYRL VSLDNDAKK
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