| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2930 |
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| Symbol | |
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| ID | 5663320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3586618 |
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| End bp | 3589050 |
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| Gene Length | 2433 bp |
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| Protein Length | 810 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237569 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001502782 |
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| Protein GI | 157962748 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACATT TCCGTTATTC GATGTTAGCA ATTGCTTGTG CATCGACTTT TTTACCAACC
AGTGTATACG CTGAAGTAAC AGATACAGCA CTCGATAATG TTGAGCGCAT TACTGTCTAT
GGCCGCCAGA ATCAGGTTGT CATGAATTCA GGTTTAGCGA CTAAGTCCGA TATGTCCTTA
ATGGAGACGC CTGCTGCGGT TGTGGTTGTG GATCAAGAGC TCATACAGGC TCAAGCTTTG
ACCAATCTAC AAGATTTAGT GCGTAACATC AGTGGTGTGA CTCAAGCGGG TAATAACTAC
GGCATTGGCG ATAACCTAGT TATCCGCGGT TTAGGGGCAA ACTACACCTA TGATGGTATG
TATGGCGGAG CGGGGCTTGG CAACACCTTT AACCCTACAC GTTCGTTAAC CAATGTCGAA
TCGGTCGAGG TGCTAAAAGG CCCGGCGACG GGGCTTTACG GTATGGGCAG TGCGGGTGGC
GTGATTAACC TCATTGAGAA GAAGCCGCAA TTTGAGTCTA AGCATGCGTT CACAGCAGAA
GTCGGTCAAT GGAATACTTA TTCTTTAGAA GCCGACAGCA CCGCGGCGAT CACCGATGAT
TTAGCCTATC GCGTCGTCGC TAAAACGGCG CGTAGCGATG GTTACCGAGA CATAGGCACC
GACCGTGATG AGATCTACAC CTCGCTTAAG TATGTGCTCG ATGATAGCCA AGACCTGATG
TTGTCGGCGA GCTATATCAA AGACGCCATT GCTGTGGACT CAATTGGTCA TCCTATTCGC
ATTTTTAACT CAGCATCTGT TGGCGGTAAA ACTGCAGGTG AAGTTAGCTG GGAAGATTTG
ATTAACGATC CGAACAACGC CGGCATTCAG CTAACAGAGG CCCAGCGTAA GCAGTTAGTG
GACTCGTTAG CCTCAAATGA TGGTTTAACT CCCTACGCAT TTGGCAATGC AGGCATTATT
TCACCGATGG CCAAGGATAA TGAGGGCGAA GAGCTGCGTT TTAAGCTGAC CCACAATATT
TATTTCACCG ATAACTTGTT TTTGAATCAA CAATTGCAGT ATCGCGATTA CACCTCAGGC
TTTGCTCGCC AAACGGGTGC CTATAACTAT GTGTATTGGG ACCGCCGAGG TGTGATTAAT
GCCGACCCTC GAGCACCACT TGTCGAAGAT GGTGTGCTTT ATCCCTATGC CGCTCGTCGT
CAGGAGTATC GTAAAGTGGA TGCCGATGAA TCATCCTGGC AGTATTTTGC AGATCTTCGT
TATGACTTCC AAATAGGCGA TATTGATAAT GAATTATTGA TAAATGCCAA CTATGAAGAT
AGAGACATCG CGTTCAAGCA ATACTCCATC TACGATGCTG ATAAAGTCAT CAAGAATAAA
GCCGGTGAGG TGATCTACCA AGGCAGCCTG CCGTACATTT ATGATATCCG TAACCCTAAT
TGGGCGGAAG GTAGCTTCGA AGATCATGAT CCGCTACTAA CCAGCAACTA CGACAAGAAA
GTCAGTGCTT GGGGAGTGGG TGTACAGCAT GTGGGGTACT TAGGTTATGG CTTTACTTCT
CGCATTGGCG TGGCGTTTAA TCAAATTAAG CAGACCTATG AGCACTTAGG CGTCGACTCT
AGATACAGTG CCAGCCGCGC CCAACCAACA CCAGAAGCCG ATACCACTGA TGATGGCATG
ACCTATAACT TAGGTTTGAC TTACATGCCA ACCGACGACT TGTCGTTTTT CGTTAATCAC
TCGAAAGGGC GCACAGCCTA TAGCATTCTT GGCAGCATTG CCGGAAACGA TACCGATAGA
GATGACAGTG AATCGGTCAG TGATGACTTA GGGATGCGCT TTAAAGCTTT TGATGATCAA
ATGTTGACTT CAATTGTGTT GTTTAAGAGT TCACGTACTA ATTTGCAATA CACAAATGTG
GATTATGAAG AGGGCGTGTC TGGGCCGAAC GTAGCTAAGT ATTTCTATAA TGGCAGCGAA
GAAACCACGG GTGTTGAGCT GGATATGAAC GCTCACCTCA ATGAGCAGTG GATGGTTAAC
GTTAATGCGG TTTATCAAGA TGCCCGCGAC AAGAAAGATC CTAATCGTTC TAGCTATGAT
ACCCGCCAAA AAGGTGTTCC TTATGTCACG GCAAGTGCTT GGGTAACCTA TGGGGCTGAT
TGGTTCTCAC TATCCAGTCC AATTAACATC AGCCTTGGCG CCAAGTATGT TGACGACAGA
AGTACTAACT CAACCTCATT TGGTATTCCA GACGGCTATG TGCCAAGTTA TACCGTGCTA
GATAGTGCGA TTAGCTATGA TGTTGACAGC TGGAAGCTGC AGTTGAATGT GAACAACTTA
TTCAATGAAG AGTATTACAG TAAGGCTATG TTCTTAGGCG GTATGCCGGG CGAAGAGCGC
AATGCCAAGC TGACACTGAC CTATCGTTTA TAG
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| Protein sequence | MKHFRYSMLA IACASTFLPT SVYAEVTDTA LDNVERITVY GRQNQVVMNS GLATKSDMSL
METPAAVVVV DQELIQAQAL TNLQDLVRNI SGVTQAGNNY GIGDNLVIRG LGANYTYDGM
YGGAGLGNTF NPTRSLTNVE SVEVLKGPAT GLYGMGSAGG VINLIEKKPQ FESKHAFTAE
VGQWNTYSLE ADSTAAITDD LAYRVVAKTA RSDGYRDIGT DRDEIYTSLK YVLDDSQDLM
LSASYIKDAI AVDSIGHPIR IFNSASVGGK TAGEVSWEDL INDPNNAGIQ LTEAQRKQLV
DSLASNDGLT PYAFGNAGII SPMAKDNEGE ELRFKLTHNI YFTDNLFLNQ QLQYRDYTSG
FARQTGAYNY VYWDRRGVIN ADPRAPLVED GVLYPYAARR QEYRKVDADE SSWQYFADLR
YDFQIGDIDN ELLINANYED RDIAFKQYSI YDADKVIKNK AGEVIYQGSL PYIYDIRNPN
WAEGSFEDHD PLLTSNYDKK VSAWGVGVQH VGYLGYGFTS RIGVAFNQIK QTYEHLGVDS
RYSASRAQPT PEADTTDDGM TYNLGLTYMP TDDLSFFVNH SKGRTAYSIL GSIAGNDTDR
DDSESVSDDL GMRFKAFDDQ MLTSIVLFKS SRTNLQYTNV DYEEGVSGPN VAKYFYNGSE
ETTGVELDMN AHLNEQWMVN VNAVYQDARD KKDPNRSSYD TRQKGVPYVT ASAWVTYGAD
WFSLSSPINI SLGAKYVDDR STNSTSFGIP DGYVPSYTVL DSAISYDVDS WKLQLNVNNL
FNEEYYSKAM FLGGMPGEER NAKLTLTYRL
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