| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2917 |
|---|
| Symbol | |
|---|
| ID | 5663307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 3569294 |
|---|
| End bp | 3570613 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 641237556 |
|---|
| Product | putative deoxyguanosinetriphosphate triphosphohydrolase |
|---|
| Protein accession | YP_001502769 |
|---|
| Protein GI | 157962735 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0232] dGTP triphosphohydrolase |
|---|
| TIGRFAM ID | [TIGR01353] deoxyguanosinetriphosphate triphosphohydrolase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGC AATGGAACAA ACTACTTTCT AGTAAACGAT TAGGTTCGTC AGAATGTCTA
GGTGATGGAA TTAGAACTGA ATATTATAGA GATTATGATC GCATTGTTTT CTCTGCTTCA
TTTAGAAGAT TAGCTAGAAA GACTCAAGTT CATCCTTTGT CATTTAATGA CCATATTCAT
AATCGATTAA CTCATTCAAT TGAAGTTAGT AGTGTTGGTC GAAGTTTAGG TTTAGCTGTT
GGTTTAGCGA TTAAAGATAA GTTACCTACT GATATAACTG CCGTTGATTT CGCCTCTATA
ATTCAAGCAG CTTGCGTCGC ACATGATATT GGAAATCCGC CATTTGGTCA TGCTGGTGAA
TATGCAATTC GACAATGGTT TACTGAAAAT GAAAATTTAT TGAATAGTAC ATTAACCATT
GCGGAACAAA ATGATTTAAA GTATTTCGAG GGTAATGCTC AAGGGTTAAG AATTGTTACT
CAATTGGAAG GTCATTATAA AGACGGTGGT TTGCGATTAA CTTATGCAAC CCTTGGAGCT
CTAATTAAAT ATCCTTGGAA ATCTGATAAT AAATTAGCGT CAGAAAAGGA GAAGTTTAAT
GTATTCCAAT CTGAAGTTGA TATTTATTCA AAAATTTCTG AAGAACTTGG ACTAATTAAG
CTAGATGATG AGCGTTATTC AAGACATCCT CTAGCTTACT TAATGGAAGC AGCTGATGAT
ATTTGCTACA AAATCTTAGA CATAGAAGAT GCTTTAGAAC TTGACTTATT AAGAATTGAA
GATGTGATCC CTATATTTAA AAAGCTATCT AATGCTGCTG AATTTAATGA AATTAATGAT
ATTGGTTCTG AATTTTCATC AAGAAAACGT ATTGTAGCTT ATAGAGCTAA GGTTATTGAT
AATTTGATAA GAGAAGTTGT AGCGATCTTT GAACATAATT ATAACGATAT AATGGAAGGT
AAGTTTGAAG GTGATTTGAT ATCTAAAGTT ACAGGTGATT GCCAGGTTGG TATTCAAGAG
ATAAAAGAAA TGACCACTGA TAAAATATTT TCTTATAGAA GAAAAATTGA ACTAGAAGTC
GGTTCTTATT CTTCAATTGA AAGCATATTA AGTGCGTTCA TAACGGCAAT TAATCAAAAA
ATCGACAATA TAGCTACATT TAAATCAAAG AGAATACTTG ATTTAATGCA AGATGACCTT
CCTAGTGGCG AGTCGACTAC TCCTTATGAA TATTATATGG CTATAACCGA TTTTGTTTCA
GGAATGACTG ATAACTATGC AACATTCATT GCAAAACAAA TTAATGGCAA TGCTAAGTAA
|
|---|
| Protein sequence | MKMQWNKLLS SKRLGSSECL GDGIRTEYYR DYDRIVFSAS FRRLARKTQV HPLSFNDHIH
NRLTHSIEVS SVGRSLGLAV GLAIKDKLPT DITAVDFASI IQAACVAHDI GNPPFGHAGE
YAIRQWFTEN ENLLNSTLTI AEQNDLKYFE GNAQGLRIVT QLEGHYKDGG LRLTYATLGA
LIKYPWKSDN KLASEKEKFN VFQSEVDIYS KISEELGLIK LDDERYSRHP LAYLMEAADD
ICYKILDIED ALELDLLRIE DVIPIFKKLS NAAEFNEIND IGSEFSSRKR IVAYRAKVID
NLIREVVAIF EHNYNDIMEG KFEGDLISKV TGDCQVGIQE IKEMTTDKIF SYRRKIELEV
GSYSSIESIL SAFITAINQK IDNIATFKSK RILDLMQDDL PSGESTTPYE YYMAITDFVS
GMTDNYATFI AKQINGNAK
|
|---|
| |