| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2812 |
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| Symbol | |
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| ID | 5663204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3433543 |
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| End bp | 3434943 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641237453 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_001502666 |
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| Protein GI | 157962632 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGAT ACCCTATGAG AGCATACCAA CTCCCTTTGA TTGCTGGAGT TTGCATAGGT
TTGTTTAGTA GCGCAGCAAT TGCAAAAACG AACCCTGCAG ATAATGCCCA GTACGAAAAA
CGCTTTCCTA AGCAATACCA AAGCTGGCAA AAAACAGCTG AGAGTAAAGA GGTGGATGAC
GCATTAGCAG GTGACCCTAA CTTGGTCATT CTGTGGGCGG GTTATGGTTT CTCTAAGGAT
TATAATGCCC CTAGAGGGCA CCAATATGCT ATTACCGATG TGAGAACCAC GTTACGAACC
GGCGCCCCAA TGAAAGAAGA TGAAGGCCCT ATGCCGATGG CCTGCTGGAG TTGTAAGAGC
CCAGATGTTC CGAGAGTTAT CGAGGGACAA GGCGAAGGGG AGTATTTCAG TGGTAAGTGG
GCTAAAGGTG GCCCTGAAAT CGTCAATGTG ATTGGCTGTG CAGATTGTCA TAAACCTGGG
ACATCAAAGT TAAGAGTTGC ACGACCCTTT GCCGAACGCG CCTTTGAAGC GATAGGTACA
CCGTTTGATA AGGCTGAAAA GAGCGAAAAG CAAAATATGG TGTGCGGACA GTGTCATGTA
GAGTATTACT TTGAGAAAAC GGCTGAGCAC CCAAACTGGG TTAAGTTCCC TTGGGATAAC
GGCACCACGG TAGAGAATAT GGAAGCGTAT TATGACAAGT TGAAGTTCAA AGATTGGACT
CATCAACTGT CAAAAGCACC AATGTTAAAA GCTCAGCATC CTGGCTATGA AACCACAGCG
CTAGGTATGC ACGGAGATAT GGGCGTATCT TGTACCGATT GTCATATGCC GCGAGTCACC
AATGCTGAGG GGAAGGAATA CACCGACCAT AATGTGGGTA GCCCATTTGA TAAGTTTGAA
TTTACCTGCG CAAATTGTCA TGAGCAGACC AAAGAGCAAT TGCAGTCTTT AGTTAAAGCG
AATAAAGATA AGGTCAATGC GCTTAAGCTT AAAGCTGAGG CAGAACTCGT TAAAGCTCAC
TTTGAAGCGG CTGCAGCATG GAAAGCAGGA GCGACAGAGC AGCAAATGGC GGCGGCATTA
ACCGATATTC GTCACGCACA GTGGCGCTGG GACTTTGCGA TTGCGTCCCA CGGTATTGCG
GCACATGCCC CAGAAGAAGG CTTACGCATT TTAGAAACCT CACTGACTAA AAGCGCTGAA
GCTCGGACTA AATTGGCGAA AGTCTTGGAT ACTCAAGGCG TTAAAGCTGC GGTCACCATT
CCTGATATTT CAACTAAAGC AAAAGCACAA GCGGTCTTAG GCATGGATAT GGATAAGATG
AATGCAGATA AAGCCATCTT TATCGAGAAA GTCGTGCCTA AATGGGAGGC TGACTATAAG
GCAGCCAATG GCGGTGAATA G
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| Protein sequence | MDGYPMRAYQ LPLIAGVCIG LFSSAAIAKT NPADNAQYEK RFPKQYQSWQ KTAESKEVDD
ALAGDPNLVI LWAGYGFSKD YNAPRGHQYA ITDVRTTLRT GAPMKEDEGP MPMACWSCKS
PDVPRVIEGQ GEGEYFSGKW AKGGPEIVNV IGCADCHKPG TSKLRVARPF AERAFEAIGT
PFDKAEKSEK QNMVCGQCHV EYYFEKTAEH PNWVKFPWDN GTTVENMEAY YDKLKFKDWT
HQLSKAPMLK AQHPGYETTA LGMHGDMGVS CTDCHMPRVT NAEGKEYTDH NVGSPFDKFE
FTCANCHEQT KEQLQSLVKA NKDKVNALKL KAEAELVKAH FEAAAAWKAG ATEQQMAAAL
TDIRHAQWRW DFAIASHGIA AHAPEEGLRI LETSLTKSAE ARTKLAKVLD TQGVKAAVTI
PDISTKAKAQ AVLGMDMDKM NADKAIFIEK VVPKWEADYK AANGGE
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