| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2747 |
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| Symbol | |
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| ID | 5663140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3357452 |
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| End bp | 3358237 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641237389 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502602 |
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| Protein GI | 157962568 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.86983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCGATTT CGTTGCGATC AGCTAGGCGT TATTTAGTAC AAAGAATGAG ACATATAATT
CAAAACCTTG GACGGCTAAA AGTCGTCCTC CTTATTACCG CGCTGTCGGT TTCTTTCTCA
GTTTTCATCA CTTTTTTGGC TTTTTCTCTT CGTCAGACAG GTGCCGTTTA CAACATTGCG
TTTTTTTTAG CCACGTTTAT TCCCTTGACT ATTGCACCTA TAGTTTCCTG GCCACTAATA
AGCTTGCTTA TGAAAGTTGA CTCTCTTGAA AAAGAGATGA GGCTGTTGGC ATCGCTAGAT
CCTTTGACAG AACTATTAAA TCGGCGGGCT TTTTTCCGTG ATGCCGAATT ATATATTCAT
CGTGCTAAGC AAGAGGGGAG GATGTTGTCT GTGATCGCAT TGGATTTGGA TAAATTTAAG
GCGATAAATG ATTGCTATGG ACATAGCGCT GGTGATGCAG TGCTAAGGCA CTTTTCTACA
ACGATAAGAG CTAACTGTCG AACGTCAGAT TTAATGGGTC GTTTAGGTGG TGAGGAGTTT
GCTCTGTTAT TGCCAAACAC GTCTGCCTCG GCCGCTTATG CGCTTGCAGA AAGGTTACAT
CAGGCTCTTA GGTTAACAGC GATTCAGTAC GGTCACTCAA CAATGCGTTA TACAGTAAGT
ATTGGTGTTA TATCAGTGGT GCCTCAAAAA ACTGACAACA TTGAAGCTCT GCTCAATAAA
GCCGATCGTT CGCTCTATCT TGCAAAAGAA ACTGGCAGAA ACTGTACCGT GGTATTCGAT
AGCTAA
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| Protein sequence | MPISLRSARR YLVQRMRHII QNLGRLKVVL LITALSVSFS VFITFLAFSL RQTGAVYNIA
FFLATFIPLT IAPIVSWPLI SLLMKVDSLE KEMRLLASLD PLTELLNRRA FFRDAELYIH
RAKQEGRMLS VIALDLDKFK AINDCYGHSA GDAVLRHFST TIRANCRTSD LMGRLGGEEF
ALLLPNTSAS AAYALAERLH QALRLTAIQY GHSTMRYTVS IGVISVVPQK TDNIEALLNK
ADRSLYLAKE TGRNCTVVFD S
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