Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2682 |
Symbol | tig |
ID | 5663075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3268300 |
End bp | 3269604 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237321 |
Product | trigger factor |
Protein accession | YP_001502537 |
Protein GI | 157962503 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000115435 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGTTT CTGTTGAAAC CACACAAGGC CTAGAGCGTC GCCTAACAAT TTCTGTACCT GCTGAGCAGA TCGAGAACAC TGTTAAAGAA GCATTAAAAA GCGAAGCTAA GCGTGCCCGT ATCCCAGGTT TCCGTCCAGG AAAAGTACCT GTAAGCGTAA TTAATAAGCG TTATGGTAGT GCAATTCGTC AAGATATCAT GGGTGAAGTG ATGCAGCGTA ACTTCGTTGA AGCAATCATT GCTGAGAAGT TAAACCCAGC TGGCGCACCT ACATTAACTC CTGGTTCAAC TGAAGGCGAA AACTTTGAGT TTGTTGCTAC TTTTGAAATC TACCCAGAAG TAGAGCTAAA AGGTCTTGAG TCAATCACTG TTGAACAGCC TACTGCTGAA GTAACAGAAG CTGACGTTGA CGCTATGATT GAAACGCTAC GTAACCAACA CGCTACTTTC GAAGTAGCAG ACCGCGCAGC GGCTGAAGGC GACAAAGCTA AAATCAACTT CGTAGGTTCA ATCGATGGCG AAGAATTCGA AGGCGGTAAA GCTGACGATT TCGAACTACA ACTAGGCAGC GGCCGTATGA TCCCAGGCTT CGAGTCTGGC GTTGAAGGTC ACAAAGCTGG TGAAGAGTTC AACATCGAAG TGACTTTCCC AGAAGATTAC CACGCTGAAA ACCTAAAGGG TAAAGTAGCG ACTTTCGCTA TCACTCTGAA CGAAGTTCAA GCGGCTAACC TTCCAGAAGT TAACGACGAG TTCGCTACAC TATTCGGTAT TACTGAAGGT GGCATCGACG CACTTCGCGC TGAAATCAGC AAGAACATGA GCCGTGAACT TGAGCAAGCG CTTAAAGCTA ACGTTAAAGA GCAAGTTCTT AATGGTCTAG TTGAGCAAAA CGACATCGAA TTGCCAACAG CACTTATCAA CGGTGAAGTA GAAGTATTGC GTAAGCAAGC TATGCAACGT TTCGGCGACC AAGCTGCAAA CATGCCTGAG CTTCCAGCTG ACCTGTTCAC TGAACAAGCT GCACGTCGCG TTAAAGTAGG TCTACTACTT GGCGAAGTGA TCAAGACTAA CGAGCTAAAA GCTGAAGATG AACGCGTTCA AGGTTTGATC GCTTCAATGG CTTCTGCTTA CGAAGATCCA AGTGAAGTTG TAGCTTACTA CAATGGTAAC GAAGAACTTA TGCAAAACAT GCGCAACGTT GCTCTAGAAG AGCAAGCAGT TGAAGCTTTG TTAAAAACTG CAACTTTGAC TGAAAAAGCA GTCAACTTTG AAGAATTTAT GAACAAGGCT ACAGGTCGCG CGTAA
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Protein sequence | MQVSVETTQG LERRLTISVP AEQIENTVKE ALKSEAKRAR IPGFRPGKVP VSVINKRYGS AIRQDIMGEV MQRNFVEAII AEKLNPAGAP TLTPGSTEGE NFEFVATFEI YPEVELKGLE SITVEQPTAE VTEADVDAMI ETLRNQHATF EVADRAAAEG DKAKINFVGS IDGEEFEGGK ADDFELQLGS GRMIPGFESG VEGHKAGEEF NIEVTFPEDY HAENLKGKVA TFAITLNEVQ AANLPEVNDE FATLFGITEG GIDALRAEIS KNMSRELEQA LKANVKEQVL NGLVEQNDIE LPTALINGEV EVLRKQAMQR FGDQAANMPE LPADLFTEQA ARRVKVGLLL GEVIKTNELK AEDERVQGLI ASMASAYEDP SEVVAYYNGN EELMQNMRNV ALEEQAVEAL LKTATLTEKA VNFEEFMNKA TGRA
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